RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ANKRD13BQ86YJ7 626 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 SLC44A2Q8IWA5 706 aaPredicted RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 TBC1D3Q8IZP1 549 aaPredicted RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 ARL14EPQ8N8R7 260 aaPredicted RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 CCDC89Q8N998 374 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TEX19Q8NA77 164 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 HMGB4Q8WW32 186 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 ZFPM2Q8WW38 1151 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 PABPC3Q9H361 631 aaKnown RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 SFXN1Q9H9B4 322 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 PTPRHQ9HD43 1115 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 TMEM45AQ9NWC5 275 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 IPO11Q9UI26 975 aaKnown RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 NOL7Q9UMY1 257 aaKnown RBP3.54□□□□□ -1.84
RBM28-207ENST00000488249 AFG3L2Q9Y4W6 797 aa3.54□□□□□ -1.84
RBM28-207ENST00000488249 RNASEH2AO75792 299 aaKnown RBP3.53□□□□□ -1.84
RBM28-207ENST00000488249 FAM200BP0CF97 657 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 PRF1P14222 555 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 RRM1P23921 792 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 NR4A2P43354 598 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 PLCD1P51178 756 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 PNLIPRP1P54315 467 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 SHC2P98077 582 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 RNASELQ05823 741 aaKnown RBP3.53□□□□□ -1.84
RBM28-207ENST00000488249 SRSF1Q07955 248 aaKnown RBP eCLIP3.53□□□□□ -1.842e-8■■□□□ 12.1
RBM28-207ENST00000488249 FOXO1Q12778 655 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 TRIM14Q14142 442 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 KRT72Q14CN4 511 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 GRAMD1BQ3KR37 738 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 ALDH1L2Q3SY69 923 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 GLIPR1L2Q4G1C9 344 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 TANGO2Q6ICL3 276 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 SULT6B1Q6IMI4 303 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 LIN54Q6MZP7 749 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 ZNF793Q6ZN11 406 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 RAB11FIP2Q7L804 512 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 PIP4P1Q86T03 277 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 CCDC117Q8IWD4 279 aaPredicted RBP3.53□□□□□ -1.84
RBM28-207ENST00000488249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.53□□□□□ -1.84
RBM28-207ENST00000488249 ADGRF4Q8IZF3 695 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 ADGRF3Q8IZF5 1079 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 CACNA2D3Q8IZS8 1091 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 ENAHQ8N8S7 591 aaPredicted RBP3.53□□□□□ -1.84
RBM28-207ENST00000488249 EXD3Q8N9H8 876 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 FAM47BQ8NA70 645 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 SCAMP5Q8TAC9 235 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 STT3BQ8TCJ2 826 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 ZFYVE19Q96K21 471 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 ZNF48Q96MX3 618 aaPredicted RBP3.53□□□□□ -1.84
RBM28-207ENST00000488249 FCRL4Q96PJ5 515 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 ZNF347Q96SE7 839 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 TUBB6Q9BUF5 446 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 HTATIP2Q9BUP3 242 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 BRD8Q9H0E9 1235 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 MLXIPQ9HAP2 919 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 PRDM8Q9NQV8 689 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 PAPOLBQ9NRJ5 636 aaKnown RBP3.53□□□□□ -1.84
RBM28-207ENST00000488249 LIN7CQ9NUP9 197 aaKnown RBP3.53□□□□□ -1.84
RBM28-207ENST00000488249 HEY2Q9UBP5 337 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 DAPP1Q9UN19 280 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.53□□□□□ -1.84
RBM28-207ENST00000488249 LMTK3Q96Q04 1460 aa3.53□□□□□ -1.84
RBM28-207ENST00000488249 LY6G6EA0A0G2JKS1 128 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 MBD3L5A6NJ08 208 aaPredicted RBP3.52□□□□□ -1.85
RBM28-207ENST00000488249 F8W810 466 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 SOCS2O14508 198 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 PRPF4O43172 522 aaKnown RBP eCLIP3.52□□□□□ -1.85
RBM28-207ENST00000488249 UGDHO60701 494 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 ALDOCP09972 364 aaKnown RBP3.52□□□□□ -1.85
RBM28-207ENST00000488249 TMEM191BP0C7N4 346 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 B4GALNT1Q00973 533 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 MTX1Q13505 466 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 LAMB3Q13751 1172 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 PGM5Q15124 567 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 RPS6KA2Q15349 733 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 TBRG1Q3YBR2 411 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 TUBB8Q3ZCM7 444 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 TTC22Q5TAA0 569 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 CCDC70Q6NSX1 233 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 ERAP2Q6P179 960 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 SUGP1Q8IWZ8 645 aaKnown RBP3.52□□□□□ -1.85
RBM28-207ENST00000488249 PAQR4Q8N4S7 273 aaPredicted RBP3.52□□□□□ -1.85
RBM28-207ENST00000488249 NRACQ8N912 160 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 OR52N4Q8NGI2 321 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 OTUD7AQ8TE49 926 aaPredicted RBP3.52□□□□□ -1.85
RBM28-207ENST00000488249 CLEC4CQ8WTT0 213 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 ERP27Q96DN0 273 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 HMCESQ96FZ2 354 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 PIMREGQ9BSJ6 248 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 TRMOQ9BU70 441 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 SORBS1Q9BX66 1292 aaKnown RBP3.52□□□□□ -1.85
RBM28-207ENST00000488249 TMEM120AQ9BXJ8 343 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 MAGEH1Q9H213 219 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 ELAC1Q9H777 363 aaKnown RBP3.52□□□□□ -1.85
RBM28-207ENST00000488249 ZNF69Q9UC07 566 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 POLG2Q9UHN1 485 aa3.52□□□□□ -1.85
RBM28-207ENST00000488249 C19orf53Q9UNZ5 99 aaPredicted RBP3.52□□□□□ -1.85
RBM28-207ENST00000488249 COPG1Q9Y678 874 aaKnown RBP3.52□□□□□ -1.85
RBM28-207ENST00000488249 ZNF335Q9H4Z2 1342 aaPredicted RBP3.51□□□□□ -1.85
RBM28-207ENST00000488249 TRBV5-3A0A0A0MS03 114 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms