RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PDCD6IPQ8WUM4 868 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 KCNN1Q92952 543 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 SIGLEC10Q96LC7 697 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 GPATCH1Q9BRR8 931 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 C20orf96Q9NUD7 363 aaPredicted RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 RABL2BQ9UNT1 228 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 SORCS3Q9UPU3 1222 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 XIRP1Q702N8 1843 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 H3BNH8 94 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 PTPN7P35236 360 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 YAP1P46937 504 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 EIF2B2P49770 351 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 MYL6P60660 151 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 NME3Q13232 169 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 IKBKEQ14164 716 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 PITRM1Q5JRX3 1037 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 LGSNQ5TDP6 509 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 STRIP1Q5VSL9 837 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 NXNQ6DKJ4 435 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TMEM179Q6ZVK1 233 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ZNF786Q8N393 782 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ADCY4Q8NFM4 1077 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 SLC10A4Q96EP9 437 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 PLEKHA8Q96JA3 519 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 COX4I2Q96KJ9 171 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 RIT2Q99578 217 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TARS2Q9BW92 718 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 NACA2Q9H009 215 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 DEFB129Q9H1M3 183 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ARHGAP28Q9P2N2 729 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 COPG2Q9UBF2 871 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 LSM1O15116 133 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 HSPA4LO95757 839 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 BCAP31P51572 246 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 SESN2P58004 480 aaPredicted RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 MTMR1Q13613 665 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ITGA7Q13683 1181 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 NOMO1Q15155 1222 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 AARS2Q5JTZ9 985 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 TRNP1Q6NT89 227 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 RSBN1LQ6PCB5 846 aaPredicted RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 GPR180Q86V85 440 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 NAT16Q8N8M0 369 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 KYQ8NBH2 561 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 DEPTORQ8TB45 409 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TMEM143Q96AN5 459 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 THAP11Q96EK4 314 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 RMND5BQ96G75 393 aaPredicted RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 MAML3Q96JK9 1138 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 RTKNQ9BST9 563 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 SYT17Q9BSW7 474 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 IMPG2Q9BZV3 1241 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 MTMR12Q9C0I1 747 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TRPV6Q9H1D0 765 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ST6GALNAC4Q9H4F1 302 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 SOX17Q9H6I2 414 aaPredicted RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 NOL11Q9H8H0 719 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 WDR41Q9HAD4 459 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 AGO4Q9HCK5 861 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 TCF7L2Q9NQB0 619 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 XPNPEP3Q9NQH7 507 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 CISHQ9NSE2 258 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ADA2Q9NZK5 511 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 AGO2Q9UKV8 859 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 USP18Q9UMW8 372 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 FAM149AA5PLN7 773 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 FAM159BA6NKW6 160 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TMEM233B4DJY2 109 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 NDUFB5O43674 189 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 OXSR1O95747 527 aaPredicted RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 ERBB2P04626 1255 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 CALB1P05937 261 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ZNF182P17025 639 aaPredicted RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 CDH8P55286 799 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 CA9Q16790 459 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 LSM12Q3MHD2 195 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 SCYL2Q6P3W7 929 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 SLC2A7Q6PXP3 512 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 C15orf52Q6ZUT6 534 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 CDAN1Q8IWY9 1227 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TMEM35BQ8NCS4 154 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 GMCL1P1Q8NEA9 526 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ACVR1CQ8NER5 493 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 KLC2Q9H0B6 622 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 DHX35Q9H5Z1 703 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 PNPLA8Q9NP80 782 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TBCCD1Q9NVR7 557 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 DNAJC28Q9NX36 388 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TSC22D4Q9Y3Q8 395 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 MFHAS1Q9Y4C4 1052 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ERVK-10P10266 1014 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 CSE1LP55060 971 aaKnown RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 RPL26P61254 145 aaKnown RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 SUPT20HL1Q3ZLR7 823 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 EPGNQ6UW88 154 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 LAYNQ6UX15 382 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 LYSMD3Q7Z3D4 306 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 CARM1Q86X55 608 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms