RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TRMT61AQ96FX7 289 aaKnown RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 KAZALD1Q96I82 304 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 PPM1MQ96MI6 270 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 UROC1Q96N76 676 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 TWNKQ96RR1 684 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 PIGSQ96S52 555 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 TIMP4Q99727 224 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 ELOVL1Q9BW60 279 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 MAF1Q9H063 256 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 ALG13Q9NP73 1137 aaKnown RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 OGFRQ9NZT2 677 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 SLC17A6Q9P2U8 582 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 VPS4AQ9UN37 437 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 SLC12A4Q9UP95 1085 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 RRP7AQ9Y3A4 280 aaKnown RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 UNC13BO14795 1591 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 SPATA31A1Q5TZJ5 1347 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 MAGI3Q5TCQ9 1506 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 TTC37Q6PGP7 1564 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 A0A087X1B8 175 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 H3BNC9 293 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 H7C1Q1 480 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 EXOC3O60645 756 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 MT-CO3P00414 261 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 ALDOAP04075 364 aaKnown RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 HNRNPCP07910 306 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 SLC3A2P08195 630 aaKnown RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 WT1P19544 449 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 CALRP27797 417 aaKnown RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 PCP4P48539 62 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 FOXL2P58012 376 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 TAS2R50P59544 299 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 HOXA4Q00056 320 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBX2Q13207 712 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 ANKRD1Q15327 319 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 CTXN3Q4LDR2 81 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 CC2D1BQ5T0F9 858 aaKnown RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 INTS11Q5TA45 600 aaKnown RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 MAP3K21Q5TCX8 1036 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 KYAT3Q6YP21 454 aaKnown RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 TRIM72Q6ZMU5 477 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 CLEC17AQ6ZS10 378 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 BBS12Q6ZW61 710 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 LDLRAD3Q86YD5 345 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 TMTC1Q8IUR5 882 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 PTGR2Q8N8N7 351 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 TEX19Q8NA77 164 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 NAXEQ8NCW5 288 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 MAFAQ8NHW3 353 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 PIBF1Q8WXW3 757 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 AKAP1Q92667 903 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 KTI12Q96EK9 354 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 MAELQ96JY0 434 aaKnown RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 HS6ST2Q96MM7 605 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 MACROD1Q9BQ69 325 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 EIF2AK1Q9BQI3 630 aaKnown RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 DUSP26Q9BV47 211 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 ADGRE3Q9BY15 652 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 WASH6PQ9NQA3 447 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 ASIC5Q9NY37 505 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 GGA3Q9NZ52 723 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 CWC15Q9P013 229 aaKnown RBP4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 SEMA5BQ9P283 1151 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 SLC13A4Q9UKG4 626 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 PCDHA10Q9Y5I2 948 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 ANKRD36BQ8N2N9 1353 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 NPC1L1Q9UHC9 1359 aa4.88□□□□□ -1.63
HMGB1P16-201ENST00000447155 RAPGEF6Q8TEU7 1601 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 SHPRHQ149N8 1683 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 CDC42BPBQ9Y5S2 1711 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 CYP3A7-CYP3A51PA0A087WV96 503 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 AGAP5A6NIR3 686 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 SAC3D1A6NKF1 404 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 BTBD19C9JJ37 291 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 CLIC1O00299 241 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 FYB1O15117 783 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 HOXC11O43248 304 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 HTATSF1O43719 755 aaKnown RBP4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 RAMP2O60895 175 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 JTBO76095 146 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 CYP3A7P24462 503 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 SLC8A1P32418 973 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 RCAN1P53805 252 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 WDR5P61964 334 aaKnown RBP4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 VAMP2P63027 116 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 CBX1P83916 185 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 CHRNDQ07001 517 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 MFSD13AQ14CX5 517 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 CNGA3Q16281 694 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 CAVIN1Q6NZI2 390 aaKnown RBP4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 TMEM88Q6PEY1 159 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 DCDC5Q6ZRR9 648 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 LAS2Q8IYD9 372 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 KRT222Q8N1A0 295 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 SRFBP1Q8NEF9 429 aaKnown RBP4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 HIC2Q96JB3 615 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 FYTTD1Q96QD9 318 aaKnown RBP4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 NPAS1Q99742 590 aa4.87□□□□□ -1.63
HMGB1P16-201ENST00000447155 PLEKHA2Q9HB19 425 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms