RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MOCS1Q9NZB8 636 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 PADI4Q9UM07 663 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 MAGED2Q9UNF1 606 aaPredicted RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 PCDHB12Q9Y5F1 795 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 APOL1O14791 398 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 PRPSAP2O60256 369 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 OCM2P0CE71 109 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 OCMP0CE72 109 aaPredicted RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 GLDCP23378 1020 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 NUP107P57740 925 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 CD300CQ08708 224 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 IKBKEQ14164 716 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 DCAF6Q58WW2 860 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 GPR141Q7Z602 305 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 MCPH1Q8NEM0 835 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 THAP11Q96EK4 314 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 PRMT6Q96LA8 375 aaPredicted RBP14.28□□□□□ -0.12
VPS52-212ENST00000445902 TBC1D23Q9NUY8 699 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 HMGXB4Q9UGU5 601 aa14.28□□□□□ -0.12
VPS52-212ENST00000445902 FUOMA2VDF0 154 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 J3QRK9 145 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 ATE1O95260 518 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 VAPBO95292 243 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 JUNP05412 331 aaKnown RBP14.27□□□□□ -0.12
VPS52-212ENST00000445902 KRT19P08727 400 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 CKMT2P17540 419 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 MX2P20592 715 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 SFNP31947 248 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 TGFB2P61812 414 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 ZNF699Q32M78 642 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 FAM47CQ5HY64 1035 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 NIPA1Q7RTP0 329 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 FIBCD1Q8N539 461 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 PCDH19Q8TAB3 1148 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 FBXL8Q96CD0 374 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 COX4I2Q96KJ9 171 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 CORO1BQ9BR76 489 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 TXNDC16Q9P2K2 825 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 PCDHGC3Q9UN70 934 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.27□□□□□ -0.12
VPS52-212ENST00000445902 SCN9AQ15858 1988 aa14.27□□□□□ -0.12
VPS52-212ENST00000445902 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.27□□□□□ -0.13
VPS52-212ENST00000445902 K7EPI3 171 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 ADAM23O75077 832 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 CBFA2T3O75081 653 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 BCAS2O75934 225 aaPredicted RBP14.27□□□□□ -0.13
VPS52-212ENST00000445902 ATG7O95352 703 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 FUCA1P04066 466 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 ICAM1P05362 532 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 GNAO1P09471 354 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 PDGFRAP16234 1089 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 CD247P20963 164 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 IL4RP24394 825 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 MGAT1P26572 445 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 CDH5P33151 784 aaPredicted RBP14.27□□□□□ -0.13
VPS52-212ENST00000445902 HOXD12P35452 270 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 GBE1Q04446 702 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 RALGDSQ12967 914 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 EMC2Q15006 297 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 ZNF786Q8N393 782 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 RXFP2Q8WXD0 754 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 NOL11Q9H8H0 719 aaKnown RBP14.27□□□□□ -0.13
VPS52-212ENST00000445902 ASNSD1Q9NWL6 643 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 TRNAU1APQ9NX07 287 aaKnown RBP14.27□□□□□ -0.13
VPS52-212ENST00000445902 BTAF1O14981 1849 aa14.27□□□□□ -0.13
VPS52-212ENST00000445902 RBM47A0AV96 593 aaKnown RBP14.26□□□□□ -0.13
VPS52-212ENST00000445902 STBD1O95210 358 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 ZBTB11O95625 1053 aaPredicted RBP14.26□□□□□ -0.13
VPS52-212ENST00000445902 ZFXP17010 805 aaPredicted RBP14.26□□□□□ -0.13
VPS52-212ENST00000445902 HOXA10P31260 410 aaPredicted RBP14.26□□□□□ -0.13
VPS52-212ENST00000445902 MAGEA3P43357 314 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 SLC27A3Q5K4L6 730 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 TMEM53Q6P2H8 277 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 CARM1Q86X55 608 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 FAM110BQ8TC76 370 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 FNIP1Q8TF40 1166 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 RSPH1Q8WYR4 309 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 PPWD1Q96BP3 646 aaKnown RBP14.26□□□□□ -0.13
VPS52-212ENST00000445902 LRRC39Q96DD0 335 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 PPP1R10Q96QC0 940 aaKnown RBP14.26□□□□□ -0.13
VPS52-212ENST00000445902 FRMD8Q9BZ67 464 aaPredicted RBP14.26□□□□□ -0.13
VPS52-212ENST00000445902 SNX15Q9NRS6 342 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 ZNHIT2Q9UHR6 403 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 AP4S1Q9Y587 144 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 AHDC1Q5TGY3 1603 aaPredicted RBP14.26□□□□□ -0.13
VPS52-212ENST00000445902 A0A1W2PPW3 197 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 M0QYV0 167 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 ACOT8O14734 319 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 GIPC1O14908 333 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 ASPAP45381 313 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 CREB5Q02930 508 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 OLIG2Q13516 323 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 PTK2BQ14289 1009 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 ARHGEF16Q5VV41 709 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 DHRS4L2Q6PKH6 230 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 GPR180Q86V85 440 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 SLC15A3Q8IY34 581 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 SNX31Q8N9S9 440 aa14.26□□□□□ -0.13
VPS52-212ENST00000445902 DQX1Q8TE96 717 aaKnown RBP14.26□□□□□ -0.13
VPS52-212ENST00000445902 TWNKQ96RR1 684 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms