RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NPIPB5A8MRT5 1133 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 C17orf100A8MU93 164 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 NPIPB4C9JG80 1138 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 FMO6PO60774 539 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 C22orf31O95567 290 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 IGHDP01880 384 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 MT-ND3P03897 115 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 CD19P15391 556 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 TLX1P31314 330 aaPredicted RBP5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 BMPR1AP36894 532 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 GP5P40197 560 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 BUD31P41223 144 aaPredicted RBP5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 EFNB1P98172 346 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 CEBPZQ03701 1054 aaKnown RBP5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 GOLGA8FQ08AF8 430 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 ST3GAL2Q16842 350 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 DCAF17Q5H9S7 520 aaPredicted RBP5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 RBM20Q5T481 1227 aaKnown RBP5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 FAM102AQ5T9C2 384 aaPredicted RBP5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 SLC9A4Q6AI14 798 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 TMEM81Q6P7N7 255 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 C17orf99Q6UX52 265 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 USP51Q70EK9 711 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 LMNTD2Q8IXW0 634 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 KIAA2013Q8IYS2 634 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 SYT2Q8N9I0 419 aaPredicted RBP5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 DUSP19Q8WTR2 217 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 DEPDC1BQ8WUY9 529 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 OSCP1Q8WVF1 389 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 ATG4AQ8WYN0 398 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 PTP4A1Q93096 173 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 FAM149B1Q96BN6 582 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 PGAM5Q96HS1 289 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 KLHL15Q96M94 604 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 OSBPL9Q96SU4 736 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 ST6GALNAC4Q9H4F1 302 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 MSL2Q9HCI7 577 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.6□□□□□ -1.512e-9■■□□□ 14.4
TM9SF3-202ENST00000443638 MTMR4Q9NYA4 1195 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 WSB2Q9NYS7 404 aaPredicted RBP5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 EPS15L1Q9UBC2 864 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 EIF2B4Q9UI10 523 aaKnown RBP5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 SERTAD3Q9UJW9 196 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 PMF1-BGLAPU3KQ54 211 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 TEX51A0A1B0GUA7 166 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 A0A1W2PS29 197 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 BTBD18B2RXH4 712 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 RTCAO00442 366 aaKnown RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 ADAMTS4O75173 837 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 RECQL4O94761 1208 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 HLA-DOAP06340 250 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 PTMAP06454 111 aaKnown RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 PRR35P0CG20 571 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 STMN1P16949 149 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 SAT1P21673 171 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 MMP8P22894 467 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 ATP6V1E1P36543 226 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 NRIP1P48552 1158 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 MTHFSP49914 203 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 SP2Q02086 613 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 UBXN1Q04323 297 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 DYRK1AQ13627 763 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 HLXQ14774 488 aaPredicted RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 C9orf152Q5JTZ5 239 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 MEX3CQ5U5Q3 659 aaKnown RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 ACSM6Q6P461 480 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 TRAT1Q6PIZ9 186 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 MAMDC4Q6UXC1 1216 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 PIWIL3Q7Z3Z3 882 aaKnown RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 CCDC91Q7Z6B0 441 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 RALYLQ86SE5 291 aaKnown RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 SDCCAG8Q86SQ7 713 aaPredicted RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 ERC1Q8IUD2 1116 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 ZBTB8BQ8NAP8 495 aaPredicted RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 CADM4Q8NFZ8 388 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 MOSPD2Q8NHP6 518 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 CNOT9Q92600 299 aaKnown RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 SPAG5Q96R06 1193 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 CPPED1Q9BRF8 314 aaPredicted RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 SYT17Q9BSW7 474 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 TUBB6Q9BUF5 446 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 SH2D4AQ9H788 454 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 POGKQ9P215 609 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 KLQ9UEF7 1012 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 INTS6Q9UL03 887 aaKnown RBP5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 MKLN1Q9UL63 735 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 PADI1Q9ULC6 663 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 ZDHHC9Q9Y397 364 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 PCDHB2Q9Y5E7 798 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 TRPV2Q9Y5S1 764 aa5.59□□□□□ -1.51
TM9SF3-202ENST00000443638 URADA6NGE7 173 aa5.58□□□□□ -1.52
TM9SF3-202ENST00000443638 C9orf118A6NHY6 69 aa5.58□□□□□ -1.52
TM9SF3-202ENST00000443638 KCNJ18B7U540 433 aa5.58□□□□□ -1.52
TM9SF3-202ENST00000443638 TAF4O00268 1085 aa5.58□□□□□ -1.52
TM9SF3-202ENST00000443638 TRIM24O15164 1050 aa5.58□□□□□ -1.52
TM9SF3-202ENST00000443638 SLC22A3O75751 556 aa5.58□□□□□ -1.52
TM9SF3-202ENST00000443638 PSMD10O75832 226 aa5.58□□□□□ -1.52
TM9SF3-202ENST00000443638 SLU7O95391 586 aaKnown RBP5.58□□□□□ -1.52
TM9SF3-202ENST00000443638 VNN1O95497 513 aa5.58□□□□□ -1.52
TM9SF3-202ENST00000443638 GGPS1O95749 300 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms