RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 NNMTP40261 264 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 RACK1P63244 317 aaKnown RBP21.45■■□□□ 1.02
CPNE1-219ENST00000440240 SLC12A1Q13621 1099 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 CST6Q15828 149 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 RAP1GAP2Q684P5 730 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 CCNI2Q6ZMN8 369 aaPredicted RBP21.45■■□□□ 1.02
CPNE1-219ENST00000440240 MMS22LQ6ZRQ5 1243 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 ATP6V0D2Q8N8Y2 350 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 BAHD1Q8TBE0 780 aaPredicted RBP21.45■■□□□ 1.02
CPNE1-219ENST00000440240 SKA1Q96BD8 255 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 OMDQ99983 421 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 XPO7Q9UIA9 1087 aaKnown RBP21.45■■□□□ 1.02
CPNE1-219ENST00000440240 RALYQ9UKM9 306 aaKnown RBP21.45■■□□□ 1.02
CPNE1-219ENST00000440240 DSPP15924 2871 aaKnown RBP21.44■■□□□ 1.02
CPNE1-219ENST00000440240 MUC22E2RYF6 1773 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-219ENST00000440240 EDDM13A0A1B0GTR0 161 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 FAM47DPA6NHR8 397 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 LRRC72A6NJI9 287 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 KCNU1A8MYU2 1149 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 F5H5T6 163 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 PCDHGA12O60330 932 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 IGLV3-25P01717 112 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 IGHV4-34P06331 123 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 SLC8A1P32418 973 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 GALCP54803 685 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 SMYD5Q6GMV2 418 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 CHSY1Q86X52 802 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 MMAAQ8IVH4 418 aaKnown RBP21.44■■□□□ 1.02
CPNE1-219ENST00000440240 PPP1R9BQ96SB3 815 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 ORAI3Q9BRQ5 295 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 ACE2Q9BYF1 805 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-219ENST00000440240 NEUROG2Q9H2A3 272 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 ADAMTS1Q9UHI8 967 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 CYTH4Q9UIA0 394 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 SLCO3A1Q9UIG8 710 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 FZD4Q9ULV1 537 aa21.44■■□□□ 1.02
CPNE1-219ENST00000440240 A0A1W2PPC4 97 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 TTC34A8MYJ7 566 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 VILLO15195 856 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 MID1O15344 667 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 GADD45BO75293 160 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-219ENST00000440240 RNASEH2AO75792 299 aaKnown RBP21.43■■□□□ 1.02
CPNE1-219ENST00000440240 CAPNS1P04632 268 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 GLI1P08151 1106 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 ABCB4P21439 1286 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 CTSOP43234 321 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-219ENST00000440240 GRK6P43250 576 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 CCT8P50990 548 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 OXCT1P55809 520 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 C21orf59P57076 290 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 CDK17Q00537 523 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 SULT2A1Q06520 285 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 SCAPQ12770 1279 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 MTA1Q13330 715 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 PDCLQ13371 301 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 EIF4EBP2Q13542 120 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-219ENST00000440240 TRIM65Q6PJ69 517 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 PROSER1Q86XN7 944 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 CREBRFQ8IUR6 639 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 OR2T34Q8NGX1 318 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 FAM129BQ96TA1 746 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 CRACR2AQ9BSW2 395 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 RWDD2AQ9UIY3 292 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 TPX2Q9ULW0 747 aaKnown RBP21.43■■□□□ 1.02
CPNE1-219ENST00000440240 ITIH6Q6UXX5 1313 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 FREM2Q5SZK8 3169 aa21.43■■□□□ 1.02
CPNE1-219ENST00000440240 A0A1W2PP55 124 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 KCNK3O14649 394 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 ATXN1LP0C7T5 689 aaKnown RBP21.42■■□□□ 1.02
CPNE1-219ENST00000440240 GOT1P17174 413 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 C5AR1P21730 350 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 CCR1P32246 355 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 USP8P40818 1118 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 CTSKP43235 329 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 EFHC1Q5JVL4 640 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 TTC39BQ5VTQ0 682 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-219ENST00000440240 NCEH1Q6PIU2 408 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 LRSAM1Q6UWE0 723 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 GBP6Q6ZN66 633 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 SND1Q7KZF4 910 aaKnown RBP eCLIP21.42■■□□□ 1.02
CPNE1-219ENST00000440240 TMPRSS7Q7RTY8 843 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 APCDD1Q8J025 514 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 PTPRN2Q92932 1015 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 RNF34Q969K3 372 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 ACP6Q9NPH0 428 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 APEX2Q9UBZ4 518 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 SERGEFQ9UGK8 458 aa21.42■■□□□ 1.02
CPNE1-219ENST00000440240 H0Y8X5 98 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 TNFSF14O43557 240 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 DKK1O94907 266 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 ADH1BP00325 375 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 PLK1P53350 603 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 SNX16P57768 344 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 TAF5Q15542 800 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 ARHGAP44Q17R89 818 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 INAVAQ3KP66 663 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 RABGAP1LQ5R372 815 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 CCAR2Q8N163 923 aaKnown RBP21.41■■□□□ 1.02
CPNE1-219ENST00000440240 PPP1R13BQ96KQ4 1090 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 RPL10LQ96L21 214 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 252.8 ms