RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 ALDH1A1P00352 501 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 SRGAP2BP0DMP2 458 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 PRKAR2AP13861 404 aaKnown RBP10.69□□□□□ -0.7
CPNE1-218ENST00000439806 TARSP26639 723 aaKnown RBP10.69□□□□□ -0.7
CPNE1-218ENST00000439806 SLC8A1P32418 973 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 CRHR1P34998 444 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 RIPK1Q13546 671 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 ITGA7Q13683 1181 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 CHI3L2Q15782 390 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 DBN1Q16643 649 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 BRMS1LQ5PSV4 323 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 RWDD4Q6NW29 188 aaKnown RBP10.69□□□□□ -0.7
CPNE1-218ENST00000439806 ZNF449Q6P9G9 518 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 KYAT3Q6YP21 454 aaKnown RBP10.69□□□□□ -0.7
CPNE1-218ENST00000439806 CDHR3Q6ZTQ4 885 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 ASRGL1Q7L266 308 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 NPWQ8N729 165 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 DNAAF3Q8N9W5 541 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 OR10T2Q8NGX3 314 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 PPP1R14CQ8TAE6 165 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 RAB3IL1Q8TBN0 382 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 URGCPQ8TCY9 931 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 ARNTL2Q8WYA1 636 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 INPP5DQ92835 1189 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 PTPRN2Q92932 1015 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 ATP2A3Q93084 1043 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 TMEM209Q96SK2 561 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 PKMYT1Q99640 499 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 TUBB6Q9BUF5 446 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 OSBPL2Q9H1P3 480 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 NOD2Q9HC29 1040 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 CASS4Q9NQ75 786 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 ARHGEF3Q9NR81 526 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 PIH1D1Q9NWS0 290 aaKnown RBP10.69□□□□□ -0.7
CPNE1-218ENST00000439806 ZFATQ9P243 1243 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 OR12D3Q9UGF7 316 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 TRIM33Q9UPN9 1127 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 SQORQ9Y6N5 450 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 PLXNA3P51805 1871 aa10.69□□□□□ -0.7
CPNE1-218ENST00000439806 ARHGAP42A6NI28 874 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 I6L893 689 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-218ENST00000439806 AP3B1O00203 1094 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 ZBTB24O43167 697 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-218ENST00000439806 IRAK2O43187 625 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 CABYRO75952 493 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 BPGMP07738 259 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 KRT16P08779 473 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 NFKB1P19838 968 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 GRIK1P39086 918 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 GP5P40197 560 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 NPY2RP49146 381 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 PDE1BQ01064 536 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 YWHAHQ04917 246 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-218ENST00000439806 TRIM71Q2Q1W2 868 aaKnown RBP10.68□□□□□ -0.7
CPNE1-218ENST00000439806 TAF1BQ53T94 588 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-218ENST00000439806 GRTP1Q5TC63 336 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 CD300LGQ6UXG3 332 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 BEND5Q7L4P6 421 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 CRLF3Q8IUI8 442 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 SCN4BQ8IWT1 228 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 DCP1BQ8IZD4 617 aaKnown RBP10.68□□□□□ -0.7
CPNE1-218ENST00000439806 UNC5BQ8IZJ1 945 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
CPNE1-218ENST00000439806 MAGEC3Q8TD91 643 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 USP33Q8TEY7 942 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 TBC1D31Q96DN5 1066 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 CERS2Q96G23 380 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 CELF6Q96J87 481 aaKnown RBP10.68□□□□□ -0.7
CPNE1-218ENST00000439806 C7orf26Q96N11 449 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 CPNE1Q99829 537 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 MECRQ9BV79 373 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 SIK2Q9H0K1 926 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 LRMDAQ9H2I8 198 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 CATSPERBQ9H7T0 1116 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 CD248Q9HCU0 757 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 SAR1AQ9NR31 198 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 ABCC13Q9NSE7 274 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 ARHGEF38Q9NXL2 777 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 SLC17A6Q9P2U8 582 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 HEY2Q9UBP5 337 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 DCDC2Q9UHG0 476 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 HAO1Q9UJM8 370 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 ADAM28Q9UKQ2 775 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 VANGL2Q9ULK5 521 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 RPS6KL1Q9Y6S9 549 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 MIA3Q5JRA6 1907 aa10.68□□□□□ -0.7
CPNE1-218ENST00000439806 DFFAO00273 331 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 TPP1O14773 563 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 ATP9BO43861 1147 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 NEBLO76041 1014 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 USP1O94782 785 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 AMHP03971 560 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 ITGA2BP08514 1039 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 ERVK-10P10266 1014 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 ELNP15502 786 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 HTR7P34969 479 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 SPRP35270 261 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 SERPINB8P50452 374 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 SLC5A3P53794 718 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 IRX4P78413 519 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms