RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 TRMOQ9BU70 441 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 MLXIPLQ9NP71 852 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 ABHD10Q9NUJ1 306 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 TMOD4Q9NZQ9 345 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 CICQ96RK0 1608 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 DOT1LQ8TEK3 1739 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 POM121BA6NF01 834 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 C2CD4BA6NLJ0 364 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 NSD2O96028 1365 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 ARP10275 920 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 DRD1P21728 446 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 AMPHP49418 695 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 VPS41P49754 854 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 MTX1Q13505 466 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 BFSP2Q13515 415 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 LEXMQ3ZCV2 418 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 C10orf71Q711Q0 1435 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 TFAP2DQ7Z6R9 452 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 PIM3Q86V86 326 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 SAMD14Q8IZD0 417 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 CCDC33Q8N5R6 958 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 CCDC150Q8NCX0 1101 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 WIPF2Q8TF74 440 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 PIGKQ92643 395 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 LTV1Q96GA3 475 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 FCRL5Q96RD9 977 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 MAGEB5Q9BZ81 275 aa5.61□□□□□ -1.51
HMGB3P5-201ENST00000428894 C4BP0C0L5 1744 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 USP54Q70EL1 1684 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 PALLDQ8WX93 1383 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 RAB3GAP2Q9H2M9 1393 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 A0A0G2JLW4 131 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 CD8B2A6NJW9 211 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 CLCA1A8K7I4 914 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 H3BNX3 289 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 CBFA2T3O75081 653 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 MMP10P09238 476 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 PSG1P11464 419 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 VEGFAP15692 232 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 FGFR2P21802 821 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 DUSP1P28562 367 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 TMF1P82094 1093 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 ZNF793Q6ZN11 406 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 ZDHHC17Q8IUH5 632 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 WDR24Q96S15 920 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 GJB4Q9NTQ9 266 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 TMEM45AQ9NWC5 275 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 TERF2IPQ9NYB0 399 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 SIRT4Q9Y6E7 314 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 SQORQ9Y6N5 450 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 UBR3Q6ZT12 1888 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 KIF13BQ9NQT8 1826 aa5.6□□□□□ -1.51
HMGB3P5-201ENST00000428894 PCDH11XQ9BZA7 1347 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 PCDH11YQ9BZA8 1340 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 FAM90A10PA6NDY2 464 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 TTC34A8MYJ7 566 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 KCNQ3O43525 872 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 USP12O75317 370 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 MYL4P12829 197 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 HOXA7P31268 230 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 MTA1Q13330 715 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 GAB1Q13480 694 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 TMEM196Q5HYL7 178 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 MRNIPQ6NTE8 343 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 USP17L6PQ6QN14 398 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 COLCA1Q6ZS62 124 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 BEND5Q7L4P6 421 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 RNF152Q8N8N0 203 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 BCAS4Q8TDM0 211 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 P2RY11Q96G91 374 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 MYO1AQ9UBC5 1043 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 ZMYND8Q9ULU4 1186 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 ARFGEF1Q9Y6D6 1849 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 N4BP2Q86UW6 1770 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 MON2Q7Z3U7 1717 aa5.59□□□□□ -1.51
HMGB3P5-201ENST00000428894 TNRC6CQ9HCJ0 1690 aaKnown RBP5.59□□□□□ -1.52
HMGB3P5-201ENST00000428894 TTC3P53804 2025 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 SBF1O95248 1867 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 SLC22A23A1A5C7 686 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 ZSCAN9O15535 394 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 TULP3O75386 442 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 CRYABP02511 175 aaKnown RBP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 SLC3A2P08195 630 aaKnown RBP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 DPEP1P16444 411 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 TSHRP16473 764 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 HOXB6P17509 224 aaKnown RBP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 RPS6KB1P23443 525 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 TKTP29401 623 aaKnown RBP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 HOXC9P31274 260 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 IDUAP35475 653 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 IGHMBP2P38935 993 aaKnown RBP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 STT3AP46977 705 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 CASP5P51878 434 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 SEMA3BQ13214 749 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 RAPGEF1Q13905 1077 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 FAM90A2PQ658T7 463 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 RBM44Q6ZP01 1051 aaKnown RBP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 KIAA0408Q6ZU52 694 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms