RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ENO1P06733 434 aaKnown RBP14.36□□□□□ -0.11
SCAF4-202ENST00000399804 TAF10Q12962 218 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 PLD1Q13393 1074 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 LAMB3Q13751 1172 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 TRIM68Q6AZZ1 485 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 TMEM174Q8WUU8 243 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 DCDC2Q9UHG0 476 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 NR2E3Q9Y5X4 410 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 COL4A5P29400 1685 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 PRRC2BQ5JSZ5 2229 aaKnown RBP14.36□□□□□ -0.11
SCAF4-202ENST00000399804 CLGNO14967 610 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 STX7O15400 261 aaKnown RBP14.36□□□□□ -0.11
SCAF4-202ENST00000399804 FGF10O15520 208 aaPredicted RBP14.36□□□□□ -0.11
SCAF4-202ENST00000399804 TLR5O60602 858 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 CNTFP26441 200 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 SERPINB4P48594 390 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 NPY2RP49146 381 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 SLC25A11Q02978 314 aaKnown RBP14.36□□□□□ -0.11
SCAF4-202ENST00000399804 FNBP1LQ5T0N5 605 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 MARCH8Q5T0T0 291 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 NLRP9Q7RTR0 991 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 LBHD1Q9BQE6 289 aaPredicted RBP14.36□□□□□ -0.11
SCAF4-202ENST00000399804 TTPALQ9BTX7 342 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.36□□□□□ -0.114e-8■■■■□ 24.8
SCAF4-202ENST00000399804 ADAM28Q9UKQ2 775 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 SNX10Q9Y5X0 201 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 CDY1Q9Y6F8 540 aa14.36□□□□□ -0.11
SCAF4-202ENST00000399804 OR6C75A6NL08 312 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 MEIS3P2A8K0S8 358 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 CHEK2O96017 543 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 VSTM1Q6UX27 236 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 PTAR1Q7Z6K3 402 aaPredicted RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 KCNMB4Q86W47 210 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 RCOR3Q9P2K3 495 aaPredicted RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 MTO1Q9Y2Z2 717 aaKnown RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 COL11A2P13942 1736 aaPredicted RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 A0A1W2PPM1 405 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 LRIG2O94898 1065 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 EOMESO95936 686 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 SERPINF2P08697 491 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 NFKBIAP25963 317 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 MMP13P45452 471 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 SERPINB8P50452 374 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 EFTUD2Q15029 972 aaKnown RBP eCLIP14.35□□□□□ -0.115e-7■■■■■ 28.8
SCAF4-202ENST00000399804 USP41Q3LFD5 358 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 MAP3K21Q5TCX8 1036 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 LMNTD2Q8IXW0 634 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 TBC1D13Q9NVG8 400 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 HEY2Q9UBP5 337 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 BCLAF3A2AJT9 711 aaKnown RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 SMIM24O75264 130 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 PBX3P40426 434 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 CASP2P42575 452 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 PSMD5Q16401 504 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 VARS2Q5ST30 1063 aaKnown RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 DPY19L2P1Q6NXN4 242 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 HFE2Q6ZVN8 426 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 TAC4Q86UU9 113 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 SERINC5Q86VE9 423 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 SCLYQ96I15 445 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 MYCBPQ99417 103 aaPredicted RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 UNKQ9C0B0 810 aaKnown RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 ENTPD7Q9NQZ7 604 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 FAM8A1Q9UBU6 413 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 TRIM33Q9UPN9 1127 aa14.35□□□□□ -0.11
SCAF4-202ENST00000399804 KIAA0100Q14667 2235 aaKnown RBP14.35□□□□□ -0.11
SCAF4-202ENST00000399804 ERI2A8K979 691 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 AMHP03971 560 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 ERFP50548 548 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 ZRANB3Q5FWF4 1079 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 SMG8Q8ND04 991 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 SLCO2A1Q92959 643 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 APOPT1Q96IL0 206 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 CDK5RAP1Q96SZ6 601 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 SHCBP1LQ9BZQ2 653 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 RNF186Q9NXI6 227 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 TLL2Q9Y6L7 1015 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 RPSAP08865 295 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 MYL4P12829 197 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 STMN1P16949 149 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 TKTP29401 623 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 HNRNPH1P31943 449 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 L1CAMP32004 1257 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 ITIH4Q14624 930 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 KIF19Q2TAC6 998 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 BRMS1LQ5PSV4 323 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 N4BP2L1Q5TBK1 243 aaPredicted RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 CTU1Q7Z7A3 348 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 TRABD2AQ86V40 505 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 SPPL2BQ8TCT7 592 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 CKAP2Q8WWK9 683 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 ATXN2LQ8WWM7 1075 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 DTLQ9NZJ0 730 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 GMIPQ9P107 970 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 RUVBL2Q9Y230 463 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 CDK5RAP2Q96SN8 1893 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 MBLAC1A4D2B0 266 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms