RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 SLC15A2Q16348 729 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 PTPRNQ16849 979 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 FUT11Q495W5 492 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 PHB2Q99623 299 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 THG1LQ9NWX6 298 aaKnown RBP15.01□□□□□ -0.01
CCDC50-201ENST00000392455 FBXW10Q5XX13 1052 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 ITIH5Q86UX2 942 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 C8orf59Q8N0T1 100 aaPredicted RBP15.01□□□□□ -0.01
CCDC50-201ENST00000392455 UBA3Q8TBC4 463 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 GPRASP2Q96D09 838 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 WDCPQ9H6R7 721 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.01□□□□□ -0.013e-9■■■■□ 22.6
CCDC50-201ENST00000392455 ZNF222Q9UK12 451 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 GPC6Q9Y625 555 aaPredicted RBP15.01□□□□□ -0.01
CCDC50-201ENST00000392455 TMCC2O75069 709 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 IFNGP01579 166 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 NTSP30990 170 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 PARK7Q99497 189 aaKnown RBP15.01□□□□□ -0.01
CCDC50-201ENST00000392455 FAM118BQ9BPY3 351 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 VCPKMTQ9H867 229 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 CITO14578 2027 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 TYSND1Q2T9J0 566 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 DHFR2Q86XF0 187 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 TMPRSS6Q8IU80 811 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 SLC44A2Q8IWA5 706 aaPredicted RBP15.01□□□□□ -0.01
CCDC50-201ENST00000392455 HNRNPLLQ8WVV9 542 aaKnown RBP15.01□□□□□ -0.01
CCDC50-201ENST00000392455 AHCYL2Q96HN2 611 aaKnown RBP15.01□□□□□ -0.01
CCDC50-201ENST00000392455 SLC4A9Q96Q91 983 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 MKNK1Q9BUB5 465 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 ZFYVE28Q9HCC9 887 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 EPB41L4AQ9HCS5 686 aaPredicted RBP15.01□□□□□ -0.01
CCDC50-201ENST00000392455 UBDO15205 165 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 CHST10O43529 356 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 TFE3P19532 575 aaPredicted RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 SLC26A3P40879 764 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 NR6A1Q15406 480 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 BROXQ5VW32 411 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 KDM7AQ6ZMT4 941 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 LPAR1Q92633 364 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 CDH9Q9ULB4 789 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 UMPSP11172 480 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 TARSP26639 723 aaKnown RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 PRKCEQ02156 737 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 SPPL2AQ8TCT8 520 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 ROGDIQ9GZN7 287 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 KCTD10Q9H3F6 313 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 NDUFAF1Q9Y375 327 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 PCDHGA3Q9Y5H0 932 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 ITSN1Q15811 1721 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 RFX3P48380 749 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 MSLNQ13421 630 aaPredicted RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 RASA2Q15283 850 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 C4orf46Q504U0 113 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 NACC2Q96BF6 587 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 ZC3H10Q96K80 434 aaKnown RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 CAPN10Q9HC96 672 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 TIMMDC1Q9NPL8 285 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 MTMR4Q9NYA4 1195 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC50-201ENST00000392455 SSR3Q9UNL2 185 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 ATP5F1P24539 256 aaPredicted RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 GRB14Q14449 540 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 TBC1D25Q3MII6 688 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 KBTBD7Q8WVZ9 684 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 PLA2G4CQ9UP65 541 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 CCZ1BP86790 482 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 CCZ1P86791 482 aaPredicted RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 SCARF1Q14162 830 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 C10orf120Q5SQS8 335 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 CKAP2Q8WWK9 683 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 GAL3ST3Q96A11 431 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 ACTR8Q9H981 624 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 NUDT5Q9UKK9 219 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 TRIM17Q9Y577 477 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 CLOCKO15516 846 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 LRPAP1P30533 357 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 CPT1AP50416 773 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 ARF3P61204 181 aaPredicted RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 ARF1P84077 181 aaKnown RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 DHRSXQ8N5I4 330 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 NSUN4Q96CB9 384 aaKnown RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 CCDC28BQ9BUN5 200 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 METTL5Q9NRN9 209 aaKnown RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 ZNRF3Q9ULT6 936 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 PNPLA7Q6ZV29 1317 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 SRP54P61011 504 aaKnown RBP15□□□□□ -0.01
CCDC50-201ENST00000392455 ABRQ12979 859 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 NFIXQ14938 502 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 NANOGNBQ7Z5D8 188 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 C4orf33Q8N1A6 199 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 C3orf18Q9UK00 162 aa15□□□□□ -0.01
CCDC50-201ENST00000392455 TRIM66O15016 1216 aa14.99□□□□□ -0.01
CCDC50-201ENST00000392455 GTF2H1P32780 548 aa14.99□□□□□ -0.01
CCDC50-201ENST00000392455 MYL6P60660 151 aa14.99□□□□□ -0.01
CCDC50-201ENST00000392455 ILF3Q12906 894 aaKnown RBP eCLIP14.99□□□□□ -0.01
CCDC50-201ENST00000392455 TCHHL1Q5QJ38 904 aaPredicted RBP14.99□□□□□ -0.01
CCDC50-201ENST00000392455 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.99□□□□□ -0.01
CCDC50-201ENST00000392455 GPN3Q9UHW5 284 aaPredicted RBP14.99□□□□□ -0.01
CCDC50-201ENST00000392455 STOMP27105 288 aa14.99□□□□□ -0.01
CCDC50-201ENST00000392455 GALCP54803 685 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms