RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 VPS50Q96JG6 964 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 DACH2Q96NX9 599 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 NOX5Q96PH1 765 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 GAL3ST1Q99999 423 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 STK33Q9BYT3 514 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 EHD1Q9H4M9 534 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 THAP9Q9H5L6 903 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 NSUN3Q9H649 340 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 C17orf75Q9HAS0 396 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 FANCEQ9HB96 536 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 ERVK-5Q9HDB9 667 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 NMRK1Q9NWW6 199 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 AATFQ9NY61 560 aaKnown RBP eCLIP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CLEC1BQ9P126 229 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CACNG4Q9UBN1 327 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 APEX2Q9UBZ4 518 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 IL19Q9UHD0 177 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 ITGB1BP2Q9UKP3 347 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 EDARQ9UNE0 448 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SMG5Q9UPR3 1016 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 WASF3Q9UPY6 502 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CORO2BQ9UQ03 480 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 AKT3Q9Y243 479 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CNPY2Q9Y2B0 182 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CARD8Q9Y2G2 431 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SMCHD1A6NHR9 2005 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SCN5AQ14524 2016 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 WASH4PA8MWX3 477 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 H0YHG0 523 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 DDX3XO00571 662 aaKnown RBP eCLIP3.69□□□□□ -1.827e-10■■■□□ 16
ECHDC1-205ENST00000368295 ACKR2O00590 384 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 FOXD2O60548 495 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SMPD2O60906 423 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 ERAL1O75616 437 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CNMDO75829 334 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 KCNH1O95259 989 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SOD2P04179 222 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 NTRK1P04629 796 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 RARBP10826 455 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 PDHBP11177 359 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 RFC1P35251 1148 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SERPINF1P36955 418 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CD96P40200 585 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 NDUFV1P49821 464 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 ZNF41P51814 821 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 RAD23AP54725 363 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SLC12A3P55017 1021 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 STARD6P59095 220 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 HERVK_113P62684 666 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 BEX3Q00994 111 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 AMPD2Q01433 879 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 POU4F1Q01851 419 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CREB5Q02930 508 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CETN1Q12798 172 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 EPS8Q12929 822 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CUL2Q13617 745 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 LASP1Q14847 261 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 UBE3CQ15386 1083 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 ZSCAN26Q16670 478 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 TCTN1Q2MV58 587 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 MAJINQ3KP22 176 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 TDRD12Q587J7 1177 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CCDC178Q5BJE1 867 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 TCP11X2Q5H9J9 407 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 METTL11BQ5VVY1 283 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 USP45Q70EL2 814 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 PIWIL3Q7Z3Z3 882 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 TMC6Q7Z403 805 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 TRIM74Q86UV6 250 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 TRIM73Q86UV7 250 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 ZNF227Q86WZ6 799 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 TRIM59Q8IWR1 403 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 TP53INP2Q8IXH6 220 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 HDDC3Q8N4P3 179 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 ARHGEF39Q8N4T4 335 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 AADATQ8N5Z0 425 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 DPP10Q8N608 796 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 PPM1NQ8N819 430 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 GBP7Q8N8V2 638 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 FAM71DQ8N9W8 422 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 KCTD6Q8NC69 237 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 BBOF1Q8ND07 529 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 RFWD2Q8NHY2 731 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 DEPDC1BQ8WUY9 529 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CHTF18Q8WVB6 975 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 WASF1Q92558 559 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CALML4Q96GE6 196 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 MSLNLQ96KJ4 702 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CNOT6LQ96LI5 555 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 AK8Q96MA6 479 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 WDR24Q96S15 920 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SCNM1Q9BWG6 230 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 PHF7Q9BWX1 381 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CARD11Q9BXL7 1154 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 FOXP3Q9BZS1 431 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 PAIP1Q9H074 479 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 BRD8Q9H0E9 1235 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 WNT5BQ9H1J7 359 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 CRLF2Q9HC73 371 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms