RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 MKI67P46013 3256 aaKnown RBP11.96□□□□□ -0.49
LINC00538-201ENST00000626109 MYO1FO00160 1098 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 NDC80O14777 642 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 MCF2LO15068 1137 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 L1CAMP32004 1257 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 LIG3P49916 1009 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 PMS2P54278 862 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 DCAF7P61962 342 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 BYSLQ13895 437 aaKnown RBP11.96□□□□□ -0.49
LINC00538-201ENST00000626109 ZBTB6Q15916 424 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 PAN2Q504Q3 1202 aaKnown RBP11.96□□□□□ -0.49
LINC00538-201ENST00000626109 EPC2Q52LR7 807 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 ZNF362Q5T0B9 420 aaPredicted RBP11.96□□□□□ -0.49
LINC00538-201ENST00000626109 DENND2CQ68D51 928 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 RAB12Q6IQ22 244 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 PACS2Q86VP3 889 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 SPERTQ8NA61 448 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 OLIG1Q8TAK6 271 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 ZNF516Q92618 1163 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 SGCDQ92629 289 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 FATE1Q969F0 183 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 COL26A1Q96A83 441 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 C18orf25Q96B23 403 aaPredicted RBP11.96□□□□□ -0.49
LINC00538-201ENST00000626109 ARHGEF26Q96DR7 871 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 TTLL2Q9BWV7 592 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 PPANQ9NQ55 473 aaKnown RBP11.96□□□□□ -0.49
LINC00538-201ENST00000626109 DPP3Q9NY33 737 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 DKK3Q9UBP4 350 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 TUBGCP4Q9UGJ1 667 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 PCYOX1Q9UHG3 505 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 RIMKLBQ9ULI2 386 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 EDARQ9UNE0 448 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 ANKRD6Q9Y2G4 727 aa11.96□□□□□ -0.49
LINC00538-201ENST00000626109 SNUPNO95149 360 aaKnown RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 C4BPAP04003 597 aaKnown RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 NUDT17P0C025 328 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 TMEM11P17152 192 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 BMP8BP34820 402 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 CCNFP41002 786 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 TUBP50607 506 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF252P-AS1Q0IIN9 211 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 TUSC3Q13454 348 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 TRPC3Q13507 836 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 BTG3Q14201 252 aaPredicted RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 ZACNQ401N2 412 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 DCAF12L1Q5VU92 463 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 TDRD10Q5VZ19 366 aaKnown RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 PKN3Q6P5Z2 889 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 PDZD4Q76G19 769 aaPredicted RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 SV2AQ7L0J3 742 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 CMTR2Q8IYT2 770 aaKnown RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 CPA6Q8N4T0 437 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 OR2W6PQ8NHA6 318 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 MAGOHBQ96A72 148 aaKnown RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF689Q96CS4 500 aaPredicted RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 NAF1Q96HR8 494 aaKnown RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 FAM84AQ96KN4 292 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 TRIM31Q9BZY9 425 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 PABPC3Q9H361 631 aaKnown RBP11.96□□□□□ -0.5
LINC00538-201ENST00000626109 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 TAS2R14Q9NYV8 317 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 UVRAGQ9P2Y5 699 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 AASSQ9UDR5 926 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 ITGA11Q9UKX5 1188 aa11.96□□□□□ -0.5
LINC00538-201ENST00000626109 ANK1P16157 1881 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 C2orf72A6NCS6 295 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 A8MVJ9 347 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 TPP1O14773 563 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 TRAPPC3O43617 180 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 FSBPO95073 299 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 MT-CO1P00395 513 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 ITGB3P05106 788 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 KRT19P08727 400 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 PAEPP09466 180 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 CTNNA2P26232 953 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 RDXP35241 583 aaKnown RBP11.95□□□□□ -0.5
LINC00538-201ENST00000626109 ASMTP46597 345 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 MAGOHP61326 146 aaKnown RBP11.95□□□□□ -0.5
LINC00538-201ENST00000626109 SOX4Q06945 474 aaPredicted RBP11.95□□□□□ -0.5
LINC00538-201ENST00000626109 INAQ16352 499 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 KRTCAP3Q53RY4 240 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 C15orf39Q6ZRI6 1047 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 GALNT7Q86SF2 657 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 FAM71AQ8IYT1 594 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 C1orf127Q8N9H9 656 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 PCYOX1LQ8NBM8 494 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 TRIM51Q9BSJ1 452 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 TXLNGYQ9BZA5 131 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 RC3H2Q9HBD1 1191 aaKnown RBP11.95□□□□□ -0.5
LINC00538-201ENST00000626109 SLC12A6Q9UHW9 1150 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 INSL6Q9Y581 213 aa11.95□□□□□ -0.5
LINC00538-201ENST00000626109 CASTOR2A6NHX0 329 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 TLL1O43897 1013 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 PCNAP12004 261 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 LRPAP1P30533 357 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 HSD17B2P37059 387 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 SEC24CP53992 1094 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 PLTPP55058 493 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 RBP5P82980 135 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms