RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 KCNT1Q5JUK3 1230 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 ZNF776Q68DI1 518 aaPredicted RBP8.15□□□□□ -1.1
CLK1-215ENST00000621181 LRRC69Q6ZNQ3 347 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 PIGZQ86VD9 579 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 FAM217AQ8IXS0 508 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 AHI1Q8N157 1196 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 ADAM32Q8TC27 787 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 TAS1R2Q8TE23 839 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 WFIKKN2Q8TEU8 576 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 TMEM174Q8WUU8 243 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 GOLGA1Q92805 767 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 SKA1Q96BD8 255 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 TMA16Q96EY4 203 aaKnown RBP8.15□□□□□ -1.1
CLK1-215ENST00000621181 HSD3B7Q9H2F3 369 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 KCTD10Q9H3F6 313 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 SGK2Q9HBY8 427 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 ASH1LQ9NR48 2969 aaKnown RBP8.15□□□□□ -1.1
CLK1-215ENST00000621181 OLA1Q9NTK5 396 aaKnown RBP8.15□□□□□ -1.1
CLK1-215ENST00000621181 GGA2Q9UJY4 613 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 AK5Q9Y6K8 562 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 PTPRQQ9UMZ3 2332 aa8.15□□□□□ -1.1
CLK1-215ENST00000621181 MGAQ8IWI9 3026 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 CALUO43852 315 aaPredicted RBP8.15□□□□□ -1.11
CLK1-215ENST00000621181 ZBED1O96006 694 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 DLDP09622 509 aaKnown RBP8.15□□□□□ -1.11
CLK1-215ENST00000621181 PABPC1P11940 636 aaKnown RBP8.15□□□□□ -1.11
CLK1-215ENST00000621181 KRT13P13646 458 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 CTSKP43235 329 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 RACK1P63244 317 aaKnown RBP8.15□□□□□ -1.11
CLK1-215ENST00000621181 PDE4CQ08493 712 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 SYCP1Q15431 976 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 TRIP4Q15650 581 aaPredicted RBP8.15□□□□□ -1.11
CLK1-215ENST00000621181 KMT5BQ4FZB7 885 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 C1orf220Q5T0J3 134 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 ADGRF1Q5T601 910 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 NYAP1Q6ZVC0 841 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 INTS8Q75QN2 995 aaKnown RBP8.15□□□□□ -1.11
CLK1-215ENST00000621181 ADIPOR2Q86V24 386 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 GATAD2AQ86YP4 633 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 FMNL3Q8IVF7 1028 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 RNF139Q8WU17 664 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 COL26A1Q96A83 441 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 TIGD1Q96MW7 591 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 PRSS16Q9NQE7 514 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 NCKAP1Q9Y2A7 1128 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 PCDHGA1Q9Y5H4 931 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 ATMQ13315 3056 aa8.15□□□□□ -1.11
CLK1-215ENST00000621181 A0A1B0GTQ1 180 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 GOLGA6L19H0YKK7 550 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 ENC1O14682 589 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 VILLO15195 856 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 RRP8O43159 456 aaKnown RBP8.14□□□□□ -1.11
CLK1-215ENST00000621181 KLRC4O43908 158 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 RNASEH1O60930 286 aaKnown RBP8.14□□□□□ -1.11
CLK1-215ENST00000621181 ZNF202O95125 648 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 ITGAVP06756 1048 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 SLFN14P0C7P3 912 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 POLR2EP19388 210 aaKnown RBP8.14□□□□□ -1.11
CLK1-215ENST00000621181 NR2F2P24468 414 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 ITPKBP27987 946 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 RPS14P62263 151 aaKnown RBP8.14□□□□□ -1.11
CLK1-215ENST00000621181 PPP3CAQ08209 521 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 DPCR1Q3MIW9 517 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 GLIPR1L2Q4G1C9 344 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 RAB41Q5JT25 222 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 PRAMEF14Q5SWL7 426 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 MBLAC2Q68D91 279 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 KIAA0895LQ68EN5 471 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 AOPEPQ8N6M6 819 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 ERCC4Q92889 916 aaPredicted RBP8.14□□□□□ -1.11
CLK1-215ENST00000621181 TMEM176AQ96HP8 235 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 CNDP2Q96KP4 475 aaKnown RBP8.14□□□□□ -1.11
CLK1-215ENST00000621181 ELF4Q99607 663 aaPredicted RBP8.14□□□□□ -1.11
CLK1-215ENST00000621181 ULBP1Q9BZM6 244 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 LRRC4Q9HBW1 653 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 AASDHPPTQ9NRN7 309 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 SUN2Q9UH99 717 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 SFMBT1Q9UHJ3 866 aa8.14□□□□□ -1.11
CLK1-215ENST00000621181 TP53BP1Q12888 1972 aaPredicted RBP8.14□□□□□ -1.11
CLK1-215ENST00000621181 A0A1W2PPC4 97 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 SMTNL1A8MU46 457 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 TK2O00142 265 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 CBX4O00257 560 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 MAPK13O15264 365 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 PAPSS1O43252 624 aaPredicted RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 MSI1O43347 362 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 RFPL3O75679 317 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 LDOC1O95751 146 aaPredicted RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 IGHV4-34P06331 123 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 CDK4P11802 303 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 PFKFB1P16118 471 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 EIF2S3P41091 472 aaKnown RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 ARRB1P49407 418 aaPredicted RBP8.13□□□□□ -1.11
CLK1-215ENST00000621181 CLDN6P56747 220 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 ST8SIA6P61647 398 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 ADIGQ0VDE8 80 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 DNAJC3Q13217 504 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 RESP18Q5W5W9 173 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 NCEH1Q6PIU2 408 aa8.13□□□□□ -1.11
CLK1-215ENST00000621181 USP30Q70CQ3 517 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms