RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 PRIM2P49643 509 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 AMPD2Q01433 879 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 NR6A1Q15406 480 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 ZC3H12AQ5D1E8 599 aaKnown RBP12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 PLPPR4Q7Z2D5 763 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 HSFY1Q96LI6 401 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 CNBD2Q96M20 576 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 CATSPER2Q96P56 530 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 SPATA16Q9BXB7 569 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 RGS18Q9NS28 235 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 THAP1Q9NVV9 213 aa12.78□□□□□ -0.36
TNFAIP3-206ENST00000612899 E7ENQ6 273 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 ACADSP16219 412 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 PSMB4P28070 264 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 MARSP56192 900 aaKnown RBP12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 TAS2R40P59535 323 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 BTG3Q14201 252 aaPredicted RBP12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 SLC45A4Q5BKX6 768 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 GRTP1Q5TC63 336 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 SDE2Q6IQ49 451 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 RNF148Q8N7C7 305 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 APBB2Q92870 758 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 KREMEN1Q96MU8 473 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 NDUFA13Q9P0J0 144 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 NCANO14594 1321 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 PRKAA1Q13131 559 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 AUHQ13825 339 aaKnown RBP12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 ATP6AP1LQ52LC2 224 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 TREML2Q5T2D2 321 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 WLSQ5T9L3 541 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 ZNF662Q6ZS27 426 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 TMEM139Q8IV31 216 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 TMEM86AQ8N2M4 240 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 MIER2Q8N344 545 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 RNF157Q96PX1 679 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 YIPF2Q9BWQ6 316 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 PIF1Q9H611 641 aa12.77□□□□□ -0.36
TNFAIP3-206ENST00000612899 HACD1B0YJ81 288 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 GUCA1CO95843 209 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 SMIM10L2AP0DMW4 78 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 SMIM10L2BP0DMW5 78 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 TTC33Q6PID6 262 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 PHF13Q86YI8 300 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 OR52K1Q8NGK4 314 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 ACOX2Q99424 681 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 PRDM12Q9H4Q4 367 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 LRRC19Q9H756 370 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 EXOSC4Q9NPD3 245 aaKnown RBP12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 SCAMP3O14828 347 aaKnown RBP12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 LYPLA2O95372 231 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 ARF4P18085 180 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 RPA3P35244 121 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 RTP1P59025 263 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 DSG1Q02413 1049 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 B3GALNT2Q8NCR0 500 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 UCMAQ8WVF2 138 aa12.77□□□□□ -0.37
TNFAIP3-206ENST00000612899 MRC1P22897 1456 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 A0A0B4J269 797 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 BTNL10A8MVZ5 291 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 MPOP05164 745 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 RAG1P15918 1043 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 CHRNB3Q05901 458 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 SPANXN3Q5MJ09 141 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 KIAA2013Q8IYS2 634 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 LRRC39Q96DD0 335 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 EMILIN2Q9BXX0 1053 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 SYNDIG1Q9H7V2 258 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 TBC1D23Q9NUY8 699 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 CRYL1Q9Y2S2 319 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 SHPRHQ149N8 1683 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 F8W810 466 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 BANF1O75531 89 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 PDE5AO76074 875 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 TOMM70O94826 608 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 TBL3Q12788 808 aaKnown RBP12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 OLFML2BQ68BL8 750 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 DUPD1Q68J44 220 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 LRRC8BQ6P9F7 803 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 FOXR2Q6PJQ5 311 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 HERC6Q8IVU3 1022 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 ZNF786Q8N393 782 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 JADE3Q92613 823 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 LPPQ93052 612 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 SPATA13Q96N96 652 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 VAT1Q99536 393 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 CPNE1Q99829 537 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 MMADHCQ9H3L0 296 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 MYPNQ86TC9 1320 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 DCXO43602 365 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 PEX10O60683 326 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 ARIH2O95376 493 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 HALP42357 657 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 PEX5P50542 639 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 RAP1GDS1P52306 607 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 PARP6Q2NL67 630 aa12.76□□□□□ -0.37
TNFAIP3-206ENST00000612899 CCDC153Q494R4 210 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms