RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SCINQ9Y6U3 715 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 MYOFQ9NZM1 2061 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 TCRBV5S1A1TA0A578 114 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 ADAM23O75077 832 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 CLDN11O75508 207 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 GJB6O95452 261 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 LMNAP02545 664 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 ASLP04424 464 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 CHRM1P11229 460 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 ZNF177Q13360 481 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 MAMLD1Q13495 774 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 STARD3Q14849 445 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 C15orf59Q2T9L4 293 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 MBLAC2Q68D91 279 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 PLEKHA7Q6IQ23 1121 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 CCAR2Q8N163 923 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 OLIG1Q8TAK6 271 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 FAM172AQ8WUF8 416 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 GABRG3Q99928 467 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 CNPY3Q9BT09 278 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 ADAM33Q9BZ11 813 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 CNOT8Q9UFF9 292 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 RAB23Q9ULC3 237 aa17.84■□□□□ 0.45
SHKBP1-212ENST00000596163 ANTXRLA6NF34 631 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 CD70P32970 193 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 ADRA1BP35368 520 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 WASP42768 502 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 ATXN1P54253 815 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 CDH4P55283 916 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 DMWDQ09019 674 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 LMAN2Q12907 356 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 BYSLQ13895 437 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 C5orf22Q49AR2 442 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 PPP1R15BQ5SWA1 713 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 TMEM92Q6UXU6 159 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 ADIPOR2Q86V24 386 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 CNGA4Q8IV77 575 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 ZNF653Q96CK0 615 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 MYEOVQ96EZ4 313 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 DNAJC7Q99615 494 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 RBSNQ9H1K0 784 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 ZDHHC4Q9NPG8 344 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 POLR3BQ9NW08 1133 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 BCCIPQ9P287 314 aaKnown RBP eCLIP17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 HCN2Q9UL51 889 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 STON1Q9Y6Q2 735 aa17.83■□□□□ 0.44
SHKBP1-212ENST00000596163 TCRBV21S2A2A0A5A6 115 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 SYNCRIPO60506 623 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 DLDP09622 509 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 PXNP49023 591 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 ST8SIA6P61647 398 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 RPL7AP62424 266 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 ZNF234Q14588 700 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 ARID5BQ14865 1188 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 USP39Q53GS9 565 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 ANO7Q6IWH7 933 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 ALKBH5Q6P6C2 394 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 CEP68Q76N32 757 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 C11orf74Q86VG3 221 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 RASSF3Q86WH2 238 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 PGBD3Q8N328 593 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 WFDC5Q8TCV5 224 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 IGSF8Q969P0 613 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 NTAN1Q96AB6 310 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 TTC17Q96AE7 1141 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 LMLNQ96KR4 655 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 ACOX2Q99424 681 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 PHOX2BQ99453 314 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 NCAPGQ9BPX3 1015 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 OSBPL2Q9H1P3 480 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 EPC1Q9H2F5 836 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 DEF6Q9H4E7 631 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 RETREG1Q9H6L5 497 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 CACNA2D2Q9NY47 1150 aa17.82■□□□□ 0.44
SHKBP1-212ENST00000596163 DRGXA6NNA5 263 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 AKR1B15C9JRZ8 316 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 CCP110O43303 1012 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 SRGAP2O75044 1071 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 RPP40O75818 363 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 AIF1P55008 147 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 SULT2A1Q06520 285 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 ENPP2Q13822 863 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 SIM2Q14190 667 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 FNDC3BQ53EP0 1204 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 CCDC122Q5T0U0 273 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 SH3PXD2AQ5TCZ1 1133 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 TMEM215Q68D42 235 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 SCYL2Q6P3W7 929 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 SERPINA13PQ6UXR4 307 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 TMC6Q7Z403 805 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 SLFN11Q7Z7L1 901 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 C14orf80Q86SX3 495 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 GAB3Q8WWW8 586 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 ANLNQ9NQW6 1124 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 ARHGAP20Q9P2F6 1191 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 MYO1AQ9UBC5 1043 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 SUN2Q9UH99 717 aa17.81■□□□□ 0.44
SHKBP1-212ENST00000596163 KIAA1549LQ6ZVL6 1849 aa17.8■□□□□ 0.44
SHKBP1-212ENST00000596163 A0A087X0T9 212 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms