RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 CKAP5Q14008 2032 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 NFKBIBQ15653 356 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 DUOXA1Q1HG43 343 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 TRIM61Q5EBN2 209 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 RAP1GAP2Q684P5 730 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 ERICH1Q86X53 443 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 ZNF677Q86XU0 584 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 AOPEPQ8N6M6 819 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 KDM1BQ8NB78 822 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 C18orf8Q96DM3 657 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 ZNF419Q96HQ0 510 aaPredicted RBP24.14■■□□□ 1.45
LSM7-204ENST00000587502 LMLNQ96KR4 655 aa24.14■■□□□ 1.45
LSM7-204ENST00000587502 XPO7Q9UIA9 1087 aaKnown RBP24.14■■□□□ 1.45
LSM7-204ENST00000587502 ZNF18P17022 549 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 ITPKAP23677 461 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 MATKP42679 507 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 COPAP53621 1224 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 OXCT1P55809 520 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 PITX1P78337 314 aaPredicted RBP24.13■■□□□ 1.45
LSM7-204ENST00000587502 PTPRNQ16849 979 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 RABGAP1LQ5R372 815 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 DAB2IPQ5VWQ8 1189 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 SLC23A3Q6PIS1 610 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 CFAP52Q8N1V2 620 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 NUP58Q9BVL2 599 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 TMEM9BQ9NQ34 198 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 STAP1Q9ULZ2 295 aa24.13■■□□□ 1.45
LSM7-204ENST00000587502 SYNJ2BP-COX16A0A087WUM0 186 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 TM4SF5O14894 197 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 IGLV3-19P01714 112 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 C7P10643 843 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 HLA-EP13747 358 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 CDK11BP21127 795 aaKnown RBP24.12■■□□□ 1.45
LSM7-204ENST00000587502 TPMTP51580 245 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 IRX4P78413 519 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 ZBTB16Q05516 673 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 SLC12A1Q13621 1099 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 ZSCAN23Q3MJ62 389 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 PPM1JQ5JR12 505 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 WDR45BQ5MNZ6 344 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 DHX40Q8IX18 779 aaKnown RBP24.12■■□□□ 1.45
LSM7-204ENST00000587502 CADM4Q8NFZ8 388 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 MYEOVQ96EZ4 313 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 TOE1Q96GM8 510 aaKnown RBP24.12■■□□□ 1.45
LSM7-204ENST00000587502 HSPA12BQ96MM6 686 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 PPP1R9BQ96SB3 815 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 PRMT1Q99873 361 aaKnown RBP24.12■■□□□ 1.45
LSM7-204ENST00000587502 GANQ9H2C0 597 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 TMEM74BQ9NUR3 256 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 WSB2Q9NYS7 404 aaPredicted RBP24.12■■□□□ 1.45
LSM7-204ENST00000587502 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.12■■□□□ 1.45
LSM7-204ENST00000587502 COX16Q9P0S2 106 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 LIMA1Q9UHB6 759 aaKnown RBP24.12■■□□□ 1.45
LSM7-204ENST00000587502 PAXBP1Q9Y5B6 917 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 CEP192Q8TEP8 1941 aa24.12■■□□□ 1.45
LSM7-204ENST00000587502 PATE3B3GLJ2 98 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 F9P00740 461 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 CSKP41240 450 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 ZNF165P49910 485 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 COPB1P53618 953 aaKnown RBP24.11■■□□□ 1.45
LSM7-204ENST00000587502 POLR2FP61218 127 aaKnown RBP24.11■■□□□ 1.45
LSM7-204ENST00000587502 NME3Q13232 169 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 TAF3Q5VWG9 929 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 SND1Q7KZF4 910 aaKnown RBP eCLIP24.11■■□□□ 1.45
LSM7-204ENST00000587502 NOP9Q86U38 636 aaKnown RBP24.11■■□□□ 1.45
LSM7-204ENST00000587502 DEFB119Q8N690 84 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 FAM207AQ9NSI2 230 aaPredicted RBP24.11■■□□□ 1.45
LSM7-204ENST00000587502 SUSD2Q9UGT4 822 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 SLC6A14Q9UN76 642 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 TNRC6BQ9UPQ9 1833 aaKnown RBP24.11■■□□□ 1.45
LSM7-204ENST00000587502 SPTBN2O15020 2390 aa24.11■■□□□ 1.45
LSM7-204ENST00000587502 LRRC10BA6NIK2 292 aa24.1■■□□□ 1.45
LSM7-204ENST00000587502 C4orf47A7E2U8 309 aa24.1■■□□□ 1.45
LSM7-204ENST00000587502 M0QYT0 321 aa24.1■■□□□ 1.45
LSM7-204ENST00000587502 SRPRAP08240 638 aaKnown RBP24.1■■□□□ 1.45
LSM7-204ENST00000587502 GNSP15586 552 aa24.1■■□□□ 1.45
LSM7-204ENST00000587502 PITRM1Q5JRX3 1037 aa24.1■■□□□ 1.45
LSM7-204ENST00000587502 ACBD5Q5T8D3 534 aaPredicted RBP24.1■■□□□ 1.45
LSM7-204ENST00000587502 SLC41A1Q8IVJ1 513 aa24.1■■□□□ 1.45
LSM7-204ENST00000587502 EPS8L1Q8TE68 723 aa24.1■■□□□ 1.45
LSM7-204ENST00000587502 PGAP3Q96FM1 320 aaPredicted RBP24.1■■□□□ 1.45
LSM7-204ENST00000587502 SPAG5Q96R06 1193 aa24.1■■□□□ 1.45
LSM7-204ENST00000587502 CNOT1A5YKK6 2376 aaKnown RBP24.1■■□□□ 1.45
LSM7-204ENST00000587502 PI4KAP42356 2102 aa24.1■■□□□ 1.45
LSM7-204ENST00000587502 NCOR2Q9Y618 2525 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 A0A1B0GVM2 712 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 TCAF2A6NFQ2 919 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 SMTNL1A8MU46 457 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 LGALS16A8MUM7 142 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 CFIP05156 583 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 SERPINF2P08697 491 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 SOX5P35711 763 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 RNASE9P60153 205 aaKnown RBP24.09■■□□□ 1.45
LSM7-204ENST00000587502 GFPT1Q06210 699 aaPredicted RBP24.09■■□□□ 1.45
LSM7-204ENST00000587502 ARID5BQ14865 1188 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 IQCB1Q15051 598 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 FSCBQ5H9T9 825 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 BRMS1LQ5PSV4 323 aa24.09■■□□□ 1.45
LSM7-204ENST00000587502 FAM102AQ5T9C2 384 aaPredicted RBP24.09■■□□□ 1.45
LSM7-204ENST00000587502 RNF219Q5W0B1 726 aaPredicted RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms