RNA–Protein interactions for RNA: ENST00000566624.5

RPL4-213, Transcript of ribosomal protein L4, human

TSL 2

Gene RPL4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL4-213	ENST00000566624	SUN2	Q9UH99	717 aa		11.14	□□□□□ -0.63
RPL4-213	ENST00000566624	FZD4	Q9ULV1	537 aa		11.14	□□□□□ -0.63
RPL4-213	ENST00000566624	SCML1	Q9UN30	329 aa		11.14	□□□□□ -0.63
RPL4-213	ENST00000566624	CA5B	Q9Y2D0	317 aa		11.14	□□□□□ -0.63
RPL4-213	ENST00000566624	CASC3	O15234	703 aa	Known RBP	11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	ATP5B	P06576	529 aa	Known RBP	11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	RALA	P11233	206 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	TGM2	P21980	687 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	SLC8A1	P32418	973 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	PSEN1	P49768	467 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	CYP2J2	P51589	502 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	METAP1	P53582	386 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	TLE1	Q04724	770 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	SLC45A4	Q5BKX6	768 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	ZNF667	Q5HYK9	610 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	SV2B	Q7L1I2	683 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	TADA2B	Q86TJ2	420 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	MS4A3	Q96HJ5	214 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	CCNL2	Q96S94	520 aa	Predicted RBP	11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	OMD	Q99983	421 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	INTS6	Q9UL03	887 aa	Known RBP	11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	ENTPD2	Q9Y5L3	495 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	NOTCH2	Q04721	2471 aa		11.13	□□□□□ -0.63
RPL4-213	ENST00000566624	ANKRD17	O75179	2603 aa	Known RBP	11.12	□□□□□ -0.63
RPL4-213	ENST00000566624		A0A087X0B3	334 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	CLIC2	O15247	247 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	PHACTR2	O75167	634 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	CENPB	P07199	599 aa	Predicted RBP	11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	RBMS1	P29558	406 aa	Known RBP	11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	MAT2A	P31153	395 aa	Known RBP	11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	DRD3	P35462	400 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	PSMD8	P48556	350 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	ASIC1	P78348	528 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	NCOA4	Q13772	614 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	RRAGB	Q5VZM2	374 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	HIST2H2BC	Q6DN03	193 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	BHLHA9	Q7RTU4	235 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	CLEC14A	Q86T13	490 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	IQCH	Q86VS3	1027 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	TMA16	Q96EY4	203 aa	Known RBP	11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	CYFIP2	Q96F07	1278 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	APOLD1	Q96LR9	279 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	PSMG3-AS1	Q96PY0	264 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	CYTH4	Q9UIA0	394 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	STOML2	Q9UJZ1	356 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	MAN2B2	Q9Y2E5	1009 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	PCDHGA8	Q9Y5G5	932 aa		11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	SPTAN1	Q13813	2472 aa	Known RBP	11.12	□□□□□ -0.63
RPL4-213	ENST00000566624	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3D	A0A087WVF3	549 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3I	A0A087WXS9	549 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3E	A0A087X179	549 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3K	A0A087X1G2	549 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TTC34	A8MYJ7	566 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3L	B9A6J9	549 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	NOBOX	O60393	691 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	C4BPA	P04003	597 aa	Known RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	GP1BA	P07359	652 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3H	P0C7X1	549 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	GOT1	P17174	413 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	POLR2E	P19388	210 aa	Known RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	CTSO	P43234	321 aa	Predicted RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	ASPA	P45381	313 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	ARID5B	Q14865	1188 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	C4orf17	Q53FE4	359 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3G	Q6DHY5	549 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3C	Q6IPX1	549 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	SPOPL	Q6IQ16	392 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	UNC93A	Q86WB7	457 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	MAPK15	Q8TD08	544 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	NDRG1	Q92597	394 aa	Known RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	TTC17	Q96AE7	1141 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	PLD4	Q96BZ4	506 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	MYEOV	Q96EZ4	313 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	CCDC97	Q96F63	343 aa	Predicted RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	KCNK4	Q9NYG8	393 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	STRIP2	Q9ULQ0	834 aa		11.11	□□□□□ -0.63
RPL4-213	ENST00000566624	DOCK9	Q9BZ29	2069 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	SPEN	Q96T58	3664 aa	Known RBP	11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	GOLGA6L7	A0A1B0GV03	622 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	RNASEH1	O60930	286 aa	Known RBP	11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	PIAS2	O75928	621 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	KIF20A	O95235	890 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	CSK	P41240	450 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	YWHAG	P61981	247 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	CLDN10	P78369	228 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	KCNMA1	Q12791	1236 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	OVGP1	Q12889	678 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	BIRC3	Q13489	604 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	TGIF1	Q15583	401 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	POM121L1P	Q3SYA9	428 aa		11.1	□□□□□ -0.63
RPL4-213	ENST00000566624	SGO2	Q562F6	1265 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms