RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SEMA4DQ92854 862 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 TMEM159Q96B96 161 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 ERBB2P04626 1255 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 RARAP10276 462 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 RPL17P18621 184 aaKnown RBP17.73■□□□□ 0.43
PTPN21-208ENST00000556564 TAF10Q12962 218 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 NYAP1Q6ZVC0 841 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 TAGAPQ8N103 731 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 MRPL1Q9BYD6 325 aaKnown RBP17.73■□□□□ 0.43
PTPN21-208ENST00000556564 CTNNAL1Q9UBT7 734 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 MDM4O15151 490 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 FMO1Q01740 532 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 ARHGAP1Q07960 439 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 PAPD7Q5XG87 772 aaKnown RBP17.73■□□□□ 0.43
PTPN21-208ENST00000556564 SGSM3Q96HU1 749 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 CDC42EP4Q9H3Q1 356 aaKnown RBP17.73■□□□□ 0.43
PTPN21-208ENST00000556564 ETNK1Q9HBU6 452 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 TMPRSS4Q9NRS4 437 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 RWDD3Q9Y3V2 267 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 EPHB6O15197 1021 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 HPCAP84074 193 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 TDRD5Q8NAT2 981 aaKnown RBP17.73■□□□□ 0.43
PTPN21-208ENST00000556564 JADE3Q92613 823 aa17.73■□□□□ 0.43
PTPN21-208ENST00000556564 TMEM63BQ5T3F8 832 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 PRSS55Q6UWB4 352 aaPredicted RBP17.72■□□□□ 0.43
PTPN21-208ENST00000556564 LAYNQ6UX15 382 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 OTOAQ7RTW8 1153 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 IFNEQ86WN2 208 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 NETO2Q8NC67 525 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 FAM237AA0A1B0GTK4 181 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 B4GALT4O60513 344 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 CCNT2O60583 730 aaKnown RBP17.72■□□□□ 0.43
PTPN21-208ENST00000556564 OR56A5P0C7T3 313 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 BMP6P22004 513 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 FMO4P31512 558 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 KCNK10P57789 538 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 SERPINB12Q96P63 405 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 TLL2Q9Y6L7 1015 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 SPACA6W5XKT8 324 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 SYCE1LA8MT33 242 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 DAB1O75553 588 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 ADH1CP00326 375 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 APOA4P06727 396 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 THOP1P52888 689 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 USP6NLQ92738 828 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 ZCCHC2Q9C0B9 1178 aaKnown RBP17.72■□□□□ 0.43
PTPN21-208ENST00000556564 BPIFA1Q9NP55 256 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 RNF103-CHMP3A0A140T963 221 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 TKTP29401 623 aaKnown RBP17.72■□□□□ 0.43
PTPN21-208ENST00000556564 CHPFQ8IZ52 775 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 MDM1Q8TC05 714 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 SNX27Q96L92 541 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 B3GNT5Q9BYG0 378 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 GTF2IRD1Q9UHL9 959 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 AIM2O14862 343 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 ZNF862O60290 1169 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 VAPBO95292 243 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 CYP1A2P05177 515 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 GOT1P17174 413 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 GRB14Q14449 540 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 RARS2Q5T160 578 aaKnown RBP17.72■□□□□ 0.43
PTPN21-208ENST00000556564 TRAPPC5Q8IUR0 188 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 PIK3R5Q8WYR1 880 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 SYTL2Q9HCH5 934 aa17.72■□□□□ 0.43
PTPN21-208ENST00000556564 MAGEB16A2A368 324 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 C22orf31O95567 290 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 FGF19O95750 216 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 PSMB4P28070 264 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 OTUB1Q96FW1 271 aaPredicted RBP17.71■□□□□ 0.43
PTPN21-208ENST00000556564 EXOC2Q96KP1 924 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 RGS18Q9NS28 235 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 PLK2Q9NYY3 685 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 MPP6Q9NZW5 540 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 CST3P01034 146 aaPredicted RBP17.71■□□□□ 0.43
PTPN21-208ENST00000556564 PRLRP16471 622 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 NME5P56597 212 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 SP2Q02086 613 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 NAT9Q9BTE0 207 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 PGAM1P18669 254 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 ELK3P41970 407 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 ABL2P42684 1182 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 HSP90AA5PQ58FG0 334 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 EFL1Q7Z2Z2 1120 aaKnown RBP17.71■□□□□ 0.43
PTPN21-208ENST00000556564 SPPL2BQ8TCT7 592 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 ZNF296Q8WUU4 475 aaPredicted RBP17.71■□□□□ 0.43
PTPN21-208ENST00000556564 DPEP3Q9H4B8 488 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 BUD23O43709 281 aaKnown RBP17.71■□□□□ 0.43
PTPN21-208ENST00000556564 ZNF7P17097 686 aaPredicted RBP17.71■□□□□ 0.43
PTPN21-208ENST00000556564 RABGGTBP53611 331 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 MGAT5Q09328 741 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 CDC16Q13042 620 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 ATP13A4Q4VNC1 1196 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 KATNAL2Q8IYT4 538 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 FAM162AQ96A26 154 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 MYOCQ99972 504 aa17.71■□□□□ 0.43
PTPN21-208ENST00000556564 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPN21-208ENST00000556564 C1QTNF3-AMACRE9PGA6 284 aa17.71■□□□□ 0.42
PTPN21-208ENST00000556564 ETS1P14921 441 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms