RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TRIM43BA6NCK2 446 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 ALG1L2C9J202 215 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 I6L893 689 aaPredicted RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 TBX3O15119 743 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 KCNJ13O60928 360 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 OFD1O75665 1012 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 LCKP06239 509 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 RFPL3SP0C7P2 107 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 CFC1BP0CG36 223 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 CFC1P0CG37 223 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 TXNP10599 105 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 AMD1P17707 334 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 CHRNB2P17787 502 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 CDK11BP21127 795 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 ACVR2AP27037 513 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 SLC7A1P30825 629 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 SLC8A1P32418 973 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 HTR7P34969 479 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 SLC16A2P36021 539 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 PBX1P40424 430 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 ATP12AP54707 1039 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 POLE2P56282 527 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 NSUN2Q08J23 767 aaKnown RBP eCLIP0.97□□□□□ -2.25
COPB1-212ENST00000534771 ARL16Q0P5N6 197 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 PMPCAQ10713 525 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 TRAF3Q13114 568 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 SEMA3BQ13214 749 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 BFSP2Q13515 415 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 FAM50AQ14320 339 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 KCNAB1Q14722 419 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 C14orf177Q52M58 125 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 TMEM240Q5SV17 173 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 SDE2Q6IQ49 451 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 ACSM6Q6P461 480 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 C9orf139Q6ZV77 190 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 TRMT1LQ7Z2T5 733 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 KLHDC8BQ8IXV7 354 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 LAS2Q8IYD9 372 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 SRFBP1Q8NEF9 429 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 OR52L2PQ8NGH6 319 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 OR52N4Q8NGI2 321 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 LILRB1Q8NHL6 650 aaPredicted RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 MBD3L2Q8NHZ7 208 aaPredicted RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 IL31RAQ8NI17 732 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 DIS3LQ8TF46 1054 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 ABHD5Q8WTS1 349 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 FAM216AQ8WUB2 273 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 GLMPQ8WWB7 406 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 IPCEF1Q8WWN9 437 aaPredicted RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 TRIM43Q96BQ3 446 aaPredicted RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 GPR78Q96P69 363 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 UHRF2Q96PU4 802 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 ZNF347Q96SE7 839 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 NUP88Q99567 741 aaPredicted RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 ABHD14AQ9BUJ0 271 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 SELENOOQ9BVL4 669 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 POLDIP3Q9BY77 421 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 LDHAL6BQ9BYZ2 381 aaPredicted RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 IL25Q9H293 177 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 CHST8Q9H2A9 424 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 PRDM16Q9HAZ2 1276 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 SCRT2Q9NQ03 307 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 DDX56Q9NY93 547 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 COL20A1Q9P218 1284 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 IL36RNQ9UBH0 155 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 CPNE7Q9UBL6 633 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 GABBR1Q9UBS5 961 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 VPS51Q9UID3 782 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 MID2Q9UJV3 735 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 CAPN11Q9UMQ6 739 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 HPSEQ9Y251 543 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 B3GNT3Q9Y2A9 372 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 ANKRD6Q9Y2G4 727 aa0.97□□□□□ -2.25
COPB1-212ENST00000534771 TMA7Q9Y2S6 64 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 LUC7L2Q9Y383 392 aaKnown RBP0.97□□□□□ -2.25
COPB1-212ENST00000534771 SAA2-SAA4A0A096LPE2 208 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 IGLV5-52A0A0A0MRZ9 124 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 SAC3D1A6NKF1 404 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 ISM1B1AKI9 464 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 H3BML4 177 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 EXTL3O43909 919 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 ZG16O60844 167 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 UBXN7O94888 489 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 ZNF883P0CG24 379 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 DRD1P21728 446 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 TGM2P21980 687 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 ITGB8P26012 769 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 CDKN1AP38936 164 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 AMTP48728 403 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 NUDT6P53370 316 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 SELENOVP59797 346 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 PHEXP78562 749 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 HDAC1Q13547 482 aaPredicted RBP0.96□□□□□ -2.26
COPB1-212ENST00000534771 ZNF267Q14586 743 aaPredicted RBP0.96□□□□□ -2.26
COPB1-212ENST00000534771 DUSP6Q16828 381 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 ALG10Q5BKT4 473 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 ALG10BQ5I7T1 473 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 C3orf38Q5JPI3 329 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 ENTPD8Q5MY95 495 aa0.96□□□□□ -2.26
COPB1-212ENST00000534771 C10orf76Q5T2E6 689 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms