RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CPT1BQ92523 772 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 GRAMD1AQ96CP6 724 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 ZDHHC12Q96GR4 267 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 KLHL32Q96NJ5 620 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 PNKPQ96T60 521 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 CPPED1Q9BRF8 314 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 PABPC3Q9H361 631 aaKnown RBP5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 HIPK3Q9H422 1215 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 CD209Q9NNX6 404 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 FBXO34Q9NWN3 711 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 IRAK4Q9NWZ3 460 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 PI4KBQ9UBF8 816 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 CNOT6Q9ULM6 557 aaKnown RBP5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 AFG3L2Q9Y4W6 797 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 RAD54BQ9Y620 910 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 CDY1Q9Y6F8 540 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 CREBBPQ92793 2442 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 SRRM3A6NNA2 597 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 EYA2O00167 538 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 MBTPS2O43462 519 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 RGS10O43665 173 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 TSPAN3O60637 253 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 SNX2O60749 519 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 KIF20AO95235 890 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 TK1P04183 234 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 MED14OSP0DP75 135 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 ACTN1P12814 892 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 MST1P26927 711 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 ZEB1P37275 1124 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 PXNP49023 591 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 CDK7P50613 346 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 IRAK1P51617 712 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 SCAPQ12770 1279 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 PRKG2Q13237 762 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 ATP1A4Q13733 1029 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 ANKRD1Q15327 319 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 TBR1Q16650 682 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 RNF151Q2KHN1 245 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 ZNF750Q32MQ0 723 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 VWA3BQ502W6 1294 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 ARHGAP15Q53QZ3 475 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 TMTC4Q5T4D3 741 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 CACHD1Q5VU97 1274 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 FCRL6Q6DN72 434 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 NFRKBQ6P4R8 1299 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 KRBA2Q6ZNG9 492 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 C1orf122Q6ZSJ8 110 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 RPAINQ86UA6 219 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 TMTC1Q8IUR5 882 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 SCYL3Q8IZE3 742 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 TMEM57Q8N5G2 664 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 PDILTQ8N807 584 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 PDPRQ8NCN5 879 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 ST8SIA2Q92186 375 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 USP6NLQ92738 828 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 SECISBP2LQ93073 1101 aaKnown RBP5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 ZBTB10Q96DT7 871 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 MAELQ96JY0 434 aaKnown RBP5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 RPGRIP1Q96KN7 1286 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 NELL2Q99435 816 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 PORCNQ9H237 461 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 SLC25A32Q9H2D1 315 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 SMC4Q9NTJ3 1288 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 TBC1D22BQ9NU19 505 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 NDUFAF4Q9P032 175 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 IFT80Q9P2H3 777 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 MORF4L1Q9UBU8 362 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 CTNNA3Q9UI47 895 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 OAZ3Q9UMX2 235 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 C19orf53Q9UNZ5 99 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 ITPR1Q14643 2758 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 SIP14410 1827 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 LOC400499M0QZD8 3231 aa5.22□□□□□ -1.57
HMGB1P23-201ENST00000518743 A0A1B0GUL6 1792 aa5.21□□□□□ -1.57
HMGB1P23-201ENST00000518743 A0A087WZ62 844 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 CCDC195A0A1B0GUA6 201 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 A0A1B0GUL7 405 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 TCAF2A6NFQ2 919 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 A6NLC8 198 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 B4E171 279 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 DIRC3C9JPN6 131 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 H7C4K7 107 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 K7ENM7 598 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 RRP9O43818 475 aaKnown RBP5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 RASAL1O95294 804 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 PRKCBP05771 671 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 SRGAP2BP0DMP2 458 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 CR2P20023 1033 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 ITGALP20701 1170 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 GCSHP23434 173 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 PRKAR1BP31321 381 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 TSPAN7P41732 249 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 BCAT1P54687 386 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 HMGCS2P54868 508 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 GPS1Q13098 491 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 TCEAL5Q5H9L2 206 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 DCAF17Q5H9S7 520 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 LIN54Q6MZP7 749 aa5.21□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZDHHC24Q6UX98 284 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms