RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 LZTS1Q9Y250 596 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 ZBTB1Q9Y2K1 713 aa3.85□□□□□ -1.79
HMGB1P29-201ENST00000505659 IKBKBO14920 756 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 SGPL1O95470 568 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 SYF2O95926 243 aaKnown RBP3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 ALDOAP04075 364 aaKnown RBP3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 HOXB2P14652 356 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 IGFBP2P18065 325 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 TGM2P21980 687 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 CIITAP33076 1130 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 KRTAP10-9P60411 292 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 GAD2Q05329 585 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 RNASELQ05823 741 aaKnown RBP3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 DLGAP5Q15398 846 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 C6orf10Q5SRN2 563 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 HMBOX1Q6NT76 420 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 LRIG3Q6UXM1 1119 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 RTL10Q7L3V2 364 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 MDGA2Q7Z553 956 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 REXO5Q96IC2 774 aaKnown RBP3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 ELAC2Q9BQ52 826 aaKnown RBP3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 IL21RQ9HBE5 538 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 SEPSECSQ9HD40 501 aaKnown RBP3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 ERVK-5Q9HDB9 667 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 OBP2BQ9NPH6 170 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 ANAPC4Q9UJX5 808 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 LAMP3Q9UQV4 416 aa3.84□□□□□ -1.79
HMGB1P29-201ENST00000505659 FAM90A18PA6NE21 464 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM90A16PA6NEW6 464 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM90A9PA6NNJ1 464 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 SLC38A8A6NNN8 435 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 LGALS16A8MUM7 142 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM90A5PA8MXJ8 464 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 PRPF4O43172 522 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 OAZ2O95190 189 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 NFATC1O95644 943 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM90A15PP0C7V4 464 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM90A14PP0C7W9 464 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 GRK5P34947 590 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 TECP42680 631 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 ALDH7A1P49419 539 aaKnown RBP3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 THBS3P49746 956 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 TLE3Q04726 772 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 SF3A3Q12874 501 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 PTGR1Q14914 329 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 SYCP2LQ5T4T6 812 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 DAB2IPQ5VWQ8 1189 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 RUSC1-AS1Q66K80 236 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 CCSAPQ6IQ19 270 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 GPSM1Q86YR5 675 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 PAQR4Q8N4S7 273 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM47BQ8NA70 645 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 ADAMTS15Q8TE58 950 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 ATP2A3Q93084 1043 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 TMEM41AQ96HV5 264 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 ADAD1Q96M93 576 aaKnown RBP3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 HTATIP2Q9BUP3 242 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 SORBS1Q9BX66 1292 aaKnown RBP3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 TP63Q9H3D4 680 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 WDR26Q9H7D7 661 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 MLXIPQ9HAP2 919 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 SPAG4Q9NPE6 437 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 NLRC4Q9NPP4 1024 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 CNTN6Q9UQ52 1028 aa3.83□□□□□ -1.8
HMGB1P29-201ENST00000505659 LMTK3Q96Q04 1460 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZNF335Q9H4Z2 1342 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 IGKV2D-30A0A075B6S6 120 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 A0A087WV62 115 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 DPPA5A6NC42 116 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 AGAP5A6NIR3 686 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 H0YGN5 161 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZC3H11AO75152 810 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 CYP3A4P08684 503 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 IFIT2P09913 472 aaKnown RBP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 TKTP29401 623 aaKnown RBP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 P2RX3P56373 397 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 GALNT1Q10472 559 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 SPARCL1Q14515 664 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 LIN54Q6MZP7 749 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 KIAA1324Q6UXG2 1013 aaKnown RBP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 GATAD2AQ86YP4 633 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 NRSN1Q8IZ57 195 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 SVIPQ8NHG7 77 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 FAM71BQ8TC56 605 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 TMEM174Q8WUU8 243 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 WDR60Q8WVS4 1066 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 WDR83Q9BRX9 315 aaKnown RBP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 SFXN1Q9H9B4 322 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 MRPL44Q9H9J2 332 aaKnown RBP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 TXNRD2Q9NNW7 524 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 ARFGAP3Q9NP61 516 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZNF580Q9UK33 172 aa3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 MAGED2Q9UNF1 606 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 COPG1Q9Y678 874 aaKnown RBP3.82□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3DA0A087WVF3 549 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3IA0A087WXS9 549 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3EA0A087X179 549 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3KA0A087X1G2 549 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3BA6NDS4 549 aa3.81□□□□□ -1.8
HMGB1P29-201ENST00000505659 TBC1D3FA6NER0 549 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms