RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 PCDH17O14917 1159 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 FYB1O15117 783 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 SUV39H1O43463 412 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 EXOC3O60645 756 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 PPFIA2O75334 1257 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 SKAP2O75563 359 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-206ENST00000502250 MT-CO3P00414 261 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 PBX1P40424 430 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 CFHR3Q02985 330 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 ICA1Q05084 483 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 DEUP1Q05D60 604 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 PROSER3Q2NL68 480 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 ZNF788Q6ZQV5 615 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 GALNT4Q8N4A0 578 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 ENAHQ8N8S7 591 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-206ENST00000502250 SEMA6DQ8NFY4 1073 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 FAM71BQ8TC56 605 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 CRAMP1Q96RY5 1269 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 ASIC5Q9NY37 505 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 KIF13BQ9NQT8 1826 aa6.84□□□□□ -1.31
ATXN3-206ENST00000502250 COL11A2P13942 1736 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-206ENST00000502250 BRCA1P38398 1863 aaKnown RBP6.83□□□□□ -1.32
ATXN3-206ENST00000502250 USP47Q96K76 1375 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 MYH14Q7Z406 1995 aaKnown RBP6.83□□□□□ -1.32
ATXN3-206ENST00000502250 TCRBV5S1A1TA0A578 114 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 LINC01548A6NM66 108 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 UBE2Q2LH0YL09 131 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 H3BNC9 293 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 PEX14O75381 377 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 ITGA5P08648 1049 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 SRGAP2BP0DMP2 458 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 ZNF37AP17032 561 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-206ENST00000502250 GPC5P78333 572 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 TFF2Q03403 129 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 PTK2BQ14289 1009 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 SPARCL1Q14515 664 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 TMEM196Q5HYL7 178 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 TTC30AQ86WT1 665 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 SKAP1Q86WV1 359 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 GATAD2AQ86YP4 633 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 P3H2Q8IVL5 708 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 ADAMTS18Q8TE60 1221 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 POF1BQ8WVV4 589 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 PMM1Q92871 262 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 ASAP1Q9ULH1 1129 aa6.83□□□□□ -1.32
ATXN3-206ENST00000502250 COL5A3P25940 1745 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-206ENST00000502250 INSRP06213 1382 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 C4AP0C0L4 1744 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 GXYLT2A0PJZ3 443 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 F5H423 210 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 SYT5O00445 386 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 PIP5K1BO14986 540 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 NPC1O15118 1278 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 LDHAP00338 332 aaKnown RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 FBLP22087 321 aaKnown RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 MMP8P22894 467 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 CCDC15Q0P6D6 951 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 CHAF1AQ13111 956 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 LARS2Q15031 903 aaKnown RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 PUM3Q15397 648 aaKnown RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 ZACNQ401N2 412 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 SMIM5Q71RC9 77 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 RSC1A1Q92681 617 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 EID2BQ96D98 161 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 ZNF764Q96H86 408 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 KAZALD1Q96I82 304 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 PAAF1Q9BRP4 392 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 TP63Q9H3D4 680 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 VPS45Q9NRW7 570 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 FZD4Q9ULV1 537 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 NCAPD2Q15021 1401 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 SMG6Q86US8 1419 aaKnown RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 POLR2AP24928 1970 aaKnown RBP6.82□□□□□ -1.32
ATXN3-206ENST00000502250 FLT4P35916 1363 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 PALLDQ8WX93 1383 aa6.82□□□□□ -1.32
ATXN3-206ENST00000502250 J3KTA2 159 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 USP1O94782 785 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 PRKCGP05129 697 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 TMIGD3P0DMS9 266 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-206ENST00000502250 DRD1P21728 446 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 PDIA3P30101 505 aaKnown RBP6.81□□□□□ -1.32
ATXN3-206ENST00000502250 COPB1P53618 953 aaKnown RBP6.81□□□□□ -1.32
ATXN3-206ENST00000502250 ALDH18A1P54886 795 aaKnown RBP6.81□□□□□ -1.32
ATXN3-206ENST00000502250 TUBA4AP68366 448 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 SLC10A2Q12908 348 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-206ENST00000502250 CSHL1Q14406 222 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 FAM187BQ17R55 369 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 CCDC144NLQ6NUI1 221 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 PIK3AP1Q6ZUJ8 805 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 FAM71DQ8N9W8 422 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 MAFAQ8NHW3 353 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-206ENST00000502250 RITA1Q96K30 269 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 PRPF18Q99633 342 aaKnown RBP6.81□□□□□ -1.32
ATXN3-206ENST00000502250 RNF26Q9BY78 433 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-206ENST00000502250 OBP2BQ9NPH6 170 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 SEMA5BQ9P283 1151 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 NSD3Q9BZ95 1437 aa6.81□□□□□ -1.32
ATXN3-206ENST00000502250 CGNL1Q0VF96 1302 aa6.8□□□□□ -1.32
ATXN3-206ENST00000502250 PCDH11XQ9BZA7 1347 aa6.8□□□□□ -1.32
ATXN3-206ENST00000502250 PCDH11YQ9BZA8 1340 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms