RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 MOCS3O95396 460 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 PRB1P04280 392 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 SETSIPP0DME0 302 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 EPB41P11171 864 aaKnown RBP14.8□□□□□ -0.04
VARS-228ENST00000495010 EIF2S3P41091 472 aaKnown RBP14.8□□□□□ -0.04
VARS-228ENST00000495010 TARDBPQ13148 414 aaKnown RBP eCLIP14.8□□□□□ -0.04
VARS-228ENST00000495010 HNRNPA1L2Q32P51 320 aaKnown RBP14.8□□□□□ -0.04
VARS-228ENST00000495010 HES3Q5TGS1 186 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 BHLHA9Q7RTU4 235 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 MMAAQ8IVH4 418 aaKnown RBP14.8□□□□□ -0.04
VARS-228ENST00000495010 GUF1Q8N442 669 aaKnown RBP14.8□□□□□ -0.04
VARS-228ENST00000495010 CARNMT1Q8N4J0 409 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 HJURPQ8NCD3 748 aaPredicted RBP14.8□□□□□ -0.04
VARS-228ENST00000495010 FIBINQ8TAL6 211 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 WFDC5Q8TCV5 224 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 SAP25Q8TEE9 199 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 TTC17Q96AE7 1141 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 RCOR1Q9UKL0 485 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 FZD4Q9ULV1 537 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 MUC22E2RYF6 1773 aaPredicted RBP14.8□□□□□ -0.04
VARS-228ENST00000495010 KNL1Q8NG31 2342 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 TARSL2A2RTX5 802 aaKnown RBP14.79□□□□□ -0.04
VARS-228ENST00000495010 CAPN9O14815 690 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 ATXN7O15265 892 aaPredicted RBP14.79□□□□□ -0.04
VARS-228ENST00000495010 VDRP11473 427 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 CMA1P23946 247 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 SLC8A1P32418 973 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 CSKP41240 450 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 CLDN6P56747 220 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 TBX4P57082 545 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 DAOAP59103 153 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 DNM1Q05193 864 aaKnown RBP14.79□□□□□ -0.04
VARS-228ENST00000495010 CUL2Q13617 745 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 CDH18Q13634 790 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 TCERG1LQ5VWI1 586 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 RNF219Q5W0B1 726 aaPredicted RBP14.79□□□□□ -0.04
VARS-228ENST00000495010 SND1Q7KZF4 910 aaKnown RBP eCLIP14.79□□□□□ -0.04
VARS-228ENST00000495010 OXR1Q8N573 874 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 OR14C36Q8NHC7 312 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 KCTD13Q8WZ19 329 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 SERAC1Q96JX3 654 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 FCRL3Q96P31 734 aaPredicted RBP14.79□□□□□ -0.04
VARS-228ENST00000495010 NRSN2Q9GZP1 204 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 SERGEFQ9UGK8 458 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 KIAA1257Q9ULG3 409 aa14.79□□□□□ -0.04
VARS-228ENST00000495010 TPX2Q9ULW0 747 aaKnown RBP14.79□□□□□ -0.04
VARS-228ENST00000495010 PLXNA2O75051 1894 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 COL5A1P20908 1838 aaPredicted RBP14.78□□□□□ -0.04
VARS-228ENST00000495010 EDDM13A0A1B0GTR0 161 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 CETN3O15182 167 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 WNT1P04628 370 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 SRPRAP08240 638 aaKnown RBP14.78□□□□□ -0.04
VARS-228ENST00000495010 EPHA8P29322 1005 aaPredicted RBP14.78□□□□□ -0.04
VARS-228ENST00000495010 SLC6A4P31645 630 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 SYKP43405 635 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 PSMD8P48556 350 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 ACADVLP49748 655 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 CCR5P51681 352 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 DCAF17Q5H9S7 520 aaPredicted RBP14.78□□□□□ -0.04
VARS-228ENST00000495010 MSANTD2Q6P1R3 559 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 SCML4Q8N228 414 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 KDM1BQ8NB78 822 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 IRGQQ8WZA9 623 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 AZIN2Q96A70 460 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 PRORYQ9H606 182 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 EBF2Q9HAK2 575 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 ADAMTS1Q9UHI8 967 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 ERVW-1Q9UQF0 538 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 SHROOM3Q8TF72 1996 aa14.78□□□□□ -0.04
VARS-228ENST00000495010 GCN1Q92616 2671 aaKnown RBP14.77□□□□□ -0.04
VARS-228ENST00000495010 TBC1D3DA0A087WVF3 549 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TBC1D3IA0A087WXS9 549 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TBC1D3EA0A087X179 549 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TBC1D3KA0A087X1G2 549 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TBC1D3FA6NER0 549 aaPredicted RBP14.77□□□□□ -0.05
VARS-228ENST00000495010 TTC34A8MYJ7 566 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TBC1D3LB9A6J9 549 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TLR4O00206 839 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 PIK3R2O00459 728 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TLX3O43711 291 aaPredicted RBP14.77□□□□□ -0.05
VARS-228ENST00000495010 ADH1BP00325 375 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TBC1D3HP0C7X1 549 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 GOT1P17174 413 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 NNMTP40261 264 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 RGS7P49802 495 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 NUCB2P80303 420 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 ILKQ13418 452 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 SHBQ15464 509 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 EDRF1Q3B7T1 1238 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 FAM133BQ5BKY9 247 aaKnown RBP14.77□□□□□ -0.05
VARS-228ENST00000495010 C9orf64Q5T6V5 341 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TBC1D3GQ6DHY5 549 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TBC1D3CQ6IPX1 549 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TBC1D3Q8IZP1 549 aaPredicted RBP14.77□□□□□ -0.05
VARS-228ENST00000495010 LSM14AQ8ND56 463 aaKnown RBP14.77□□□□□ -0.05
VARS-228ENST00000495010 EEF2KMTQ96G04 330 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 MYO19Q96H55 970 aa14.77□□□□□ -0.05
VARS-228ENST00000495010 TP53BP1Q12888 1972 aaPredicted RBP14.76□□□□□ -0.05
VARS-228ENST00000495010 A0A1W2PR77 199 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms