RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	CSNK1G1	Q9HCP0	422 aa		12.82	□□□□□ -0.36
SBF1-208	ENST00000477234	KRT82	Q9NSB4	513 aa		12.82	□□□□□ -0.36
SBF1-208	ENST00000477234	TMEM30A	Q9NV96	361 aa		12.82	□□□□□ -0.36
SBF1-208	ENST00000477234	STRIP2	Q9ULQ0	834 aa		12.82	□□□□□ -0.36
SBF1-208	ENST00000477234	MAPK8IP1	Q9UQF2	711 aa		12.82	□□□□□ -0.36
SBF1-208	ENST00000477234	SPTAN1	Q13813	2472 aa	Known RBP	12.82	□□□□□ -0.36
SBF1-208	ENST00000477234	TLR4	O00206	839 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	STC2	O76061	302 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	CD44	P16070	742 aa	Known RBP	12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	MLLT3	P42568	568 aa	Predicted RBP	12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	CCR5	P51681	352 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	GABRE	P78334	506 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	DAB2	P98082	770 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	FKBP3	Q00688	224 aa	Known RBP	12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	SERINC3	Q13530	473 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	IQCB1	Q15051	598 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	MPPE1	Q53F39	396 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	COLEC12	Q5KU26	742 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	SFMBT2	Q5VUG0	894 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	CCDC81	Q6ZN84	652 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	GAS2L3	Q86XJ1	694 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	AHI1	Q8N157	1196 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	ARHGAP18	Q8N392	663 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	OR5B17	Q8NGF7	314 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	OR2T34	Q8NGX1	318 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	ANP32B	Q92688	251 aa	Known RBP	12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	HPS3	Q969F9	1004 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	WBP2	Q969T9	261 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	TMEM245	Q9H330	911 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	DPEP3	Q9H4B8	488 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	PCIF1	Q9H4Z3	704 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	USP29	Q9HBJ7	922 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	CLIC5	Q9NZA1	410 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	FZD4	Q9ULV1	537 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	TRAF3IP3	Q9Y228	551 aa		12.81	□□□□□ -0.36
SBF1-208	ENST00000477234	CLSTN1	O94985	981 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	TBX18	O95935	607 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	IGHV4-34	P06331	123 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	GP1BA	P07359	652 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	TPM2	P07951	284 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	FAM200B	P0CF97	657 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	DLAT	P10515	647 aa	Known RBP	12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	RARG	P13631	454 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	PRKCSH	P14314	528 aa	Predicted RBP	12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	DUSP3	P51452	185 aa	Predicted RBP	12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	CASP5	P51878	434 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	AP3M2	P53677	418 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	RPS14	P62263	151 aa	Known RBP	12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	KCNA1	Q09470	495 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	ZNF211	Q13398	564 aa	Predicted RBP	12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	NFIL3	Q16649	462 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	KCNT1	Q5JUK3	1230 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	LAYN	Q6UX15	382 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	LUZP1	Q86V48	1076 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	NELFCD	Q8IXH7	590 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	RNF214	Q8ND24	703 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	CEP63	Q96MT8	703 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	IRX2	Q9BZI1	471 aa	Predicted RBP	12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	ABCG4	Q9H172	646 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	THAP9	Q9H5L6	903 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	VRTN	Q9H8Y1	702 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	FBXL12	Q9NXK8	326 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	NAGPA	Q9UK23	515 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	SSUH2	Q9Y2M2	353 aa		12.8	□□□□□ -0.36
SBF1-208	ENST00000477234	CBX4	O00257	560 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	CETN3	O15182	167 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	PHACTR2	O75167	634 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	USP12	O75317	370 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	GNA14	O95837	355 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	AFP	P02771	609 aa	Known RBP	12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	DLD	P09622	509 aa	Known RBP	12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	ALPPL2	P10696	532 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	GP1BB	P13224	206 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	CDK11B	P21127	795 aa	Known RBP	12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	CORO1A	P31146	461 aa	Known RBP	12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	HARS2	P49590	506 aa	Known RBP	12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	STX17	P56962	302 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	MAP3K7CL	P57077	242 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	ST8SIA6	P61647	398 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	NFATC3	Q12968	1075 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	ZNF667	Q5HYK9	610 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	TTI2	Q6NXR4	508 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	UNC93A	Q86WB7	457 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	FUK	Q8N0W3	1084 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	MFSD2A	Q8NA29	543 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	TMEM174	Q8WUU8	243 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	SERAC1	Q96JX3	654 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	SLC6A18	Q96N87	628 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	CGRRF1	Q99675	332 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	OMD	Q99983	421 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	ORAI3	Q9BRQ5	295 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	ARHGAP9	Q9BRR9	750 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	RBSN	Q9H1K0	784 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	PABPC3	Q9H361	631 aa	Known RBP	12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	KCTD10	Q9H3F6	313 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	GRPEL1	Q9HAV7	217 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	PRSS16	Q9NQE7	514 aa		12.79	□□□□□ -0.36
SBF1-208	ENST00000477234	SLCO1B1	Q9Y6L6	691 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 364.4 ms