RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ATP2C2O75185 946 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 LYPLA2O95372 231 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 PROZP22891 400 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 PPP2R3AQ06190 1150 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 PPP2R5AQ15172 486 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 CST6Q15828 149 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 ZNF630Q2M218 657 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-206ENST00000471968 HECTD3Q5T447 861 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 SPATA1Q5VX52 437 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 TDRD10Q5VZ19 366 aaKnown RBP6.91□□□□□ -1.3
HDAC3-206ENST00000471968 CLEC9AQ6UXN8 241 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 HTR3DQ70Z44 454 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 RD3Q7Z3Z2 195 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 CHTF18Q8WVB6 975 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 GLMNQ92990 594 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 PKMYT1Q99640 499 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 IL12RB2Q99665 862 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 EIF2AK1Q9BQI3 630 aaKnown RBP6.91□□□□□ -1.3
HDAC3-206ENST00000471968 EFHD1Q9BUP0 239 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 SRRTQ9BXP5 876 aaKnown RBP6.91□□□□□ -1.3
HDAC3-206ENST00000471968 B3GNT4Q9C0J1 378 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 RSPH9Q9H1X1 276 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-206ENST00000471968 MTG2Q9H4K7 406 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 CCSER2Q9H7U1 834 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 PLEKHA5Q9HAU0 1116 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 MCCC2Q9HCC0 563 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 RBM28Q9NW13 759 aaKnown RBP6.91□□□□□ -1.3
HDAC3-206ENST00000471968 DDX43Q9NXZ2 648 aaKnown RBP6.91□□□□□ -1.3
HDAC3-206ENST00000471968 FZD4Q9ULV1 537 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 PADI4Q9UM07 663 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 PLA2G4CQ9UP65 541 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 DMTF1Q9Y222 760 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 OSGIN2Q9Y236 505 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 AQP9O43315 295 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 TIMM44O43615 452 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 RNASEH1O60930 286 aaKnown RBP6.9□□□□□ -1.3
HDAC3-206ENST00000471968 BDNFP23560 247 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 MAGEA11P43364 429 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 NOP2P46087 812 aaKnown RBP6.9□□□□□ -1.3
HDAC3-206ENST00000471968 TAF6P49848 677 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 PMS2P54278 862 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 C1QBPQ07021 282 aaKnown RBP6.9□□□□□ -1.3
HDAC3-206ENST00000471968 ZFP36L1Q07352 338 aaKnown RBP6.9□□□□□ -1.3
HDAC3-206ENST00000471968 C16orf72Q14CZ0 275 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 ARHGAP44Q17R89 818 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 PHF19Q5T6S3 580 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 FYB2Q5VWT5 728 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 SND1Q7KZF4 910 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDAC3-206ENST00000471968 FJX1Q86VR8 437 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 MMAAQ8IVH4 418 aaKnown RBP6.9□□□□□ -1.3
HDAC3-206ENST00000471968 SLC22A18ASQ8N1D0 253 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 CISD2Q8N5K1 135 aaKnown RBP6.9□□□□□ -1.3
HDAC3-206ENST00000471968 OR13H1Q8NG92 308 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 LMX1AQ8TE12 382 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 CCDC74AQ96AQ1 378 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 C14orf79Q96F83 325 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 IFT74Q96LB3 600 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 ACBD6Q9BR61 282 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 BOCQ9BWV1 1114 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 CXXC4Q9H2H0 198 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 KCNMB3Q9NPA1 279 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 CYTH4Q9UIA0 394 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 LSM7Q9UK45 103 aaKnown RBP6.9□□□□□ -1.3
HDAC3-206ENST00000471968 ADAM21Q9UKJ8 722 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 CLEC4EQ9ULY5 219 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 PCDHA12Q9UN75 941 aa6.9□□□□□ -1.3
HDAC3-206ENST00000471968 MRPS18BQ9Y676 258 aaKnown RBP6.9□□□□□ -1.3
HDAC3-206ENST00000471968 RYR3Q15413 4870 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 ZSCAN5CA6NGD5 496 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 ANP32CO43423 234 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 HCRTO43612 131 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 LRCH4O75427 683 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 PENKP01210 267 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 ADSLP30566 484 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 SLC8A1P32418 973 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 LIFRP42702 1097 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 IST1P53990 364 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 PDE1AP54750 535 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 ITGA1P56199 1179 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 NOP14P78316 857 aaKnown RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 RTN1Q16799 776 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 CRTC2Q53ET0 693 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 SLC6A19Q695T7 634 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 VSTM1Q6UX27 236 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 SYNE3Q6ZMZ3 975 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 BNC2Q6ZN30 1099 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 PARS2Q7L3T8 475 aaKnown RBP6.89□□□□□ -1.31
HDAC3-206ENST00000471968 TMEM135Q86UB9 458 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 CATSPER3Q86XQ3 398 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 PDCL2Q8N4E4 241 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 AADATQ8N5Z0 425 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 DNAJB8Q8NHS0 232 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 FBXO32Q969P5 355 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 FAM212AQ96EL1 285 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 IFT43Q96FT9 208 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 NOX5Q96PH1 765 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 TAAR9Q96RI9 348 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 FOXC2Q99958 501 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 HSD17B14Q9BPX1 270 aa6.89□□□□□ -1.31
HDAC3-206ENST00000471968 SLC25A23Q9BV35 468 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms