RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PRKAG3Q9UGI9 489 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 FIS1Q9Y3D6 152 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 LTBP3Q9NS15 1303 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 COL11A1P12107 1806 aaPredicted RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 SMIM31A0A1B0GVY4 71 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 C17orf102A2RUQ5 167 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 CFAP69A5D8W1 941 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 NOTOA8MTQ0 251 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 PSMG1O95456 288 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 VDRP11473 427 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 ATP6V1B1P15313 513 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 TPH1P17752 444 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 PSEN2P49810 448 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 VCPP55072 806 aaKnown RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 FSCN1Q16658 493 aaKnown RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 DUSP28Q4G0W2 176 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 PPP2R2DQ66LE6 453 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 UBE2Q1Q7Z7E8 422 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 ADGRF2Q8IZF7 708 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 SNRNP25Q9BV90 132 aaKnown RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 COL2A1P02458 1487 aaPredicted RBP12.66□□□□□ -0.38
USP11-206ENST00000469080 ADGRA2Q96PE1 1338 aa12.66□□□□□ -0.38
USP11-206ENST00000469080 SMIM28A0A1B0GU29 152 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 KANSL1LA0AUZ9 987 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 C2orf71A6NGG8 1288 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 ADAM23O75077 832 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 KPNA1P52294 538 aaPredicted RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 AP3M2P53677 418 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 HTRA3P83110 453 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 MGAT5Q09328 741 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 MSLNQ13421 630 aaPredicted RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 SIX1Q15475 284 aaPredicted RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 CLUL1Q15846 466 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 ACSBG2Q5FVE4 666 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 FAM209AQ5JX71 171 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 FNBP1LQ5T0N5 605 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 SPRYD7Q5W111 196 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 TP53INP2Q8IXH6 220 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 UNC5BQ8IZJ1 945 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 DCLK2Q8N568 766 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 PPTC7Q8NI37 304 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 ART4Q93070 314 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 SHCBP1LQ9BZQ2 653 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 LRRC19Q9H756 370 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 VTA1Q9NP79 307 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 NPHS2Q9NP85 383 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 TRNAU1APQ9NX07 287 aaKnown RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 NENFQ9UMX5 172 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 HTTP42858 3142 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 NT5C1B-RDH14C9J2C7 533 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 F8W810 466 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 C2CD2LO14523 706 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 CBFA2T3O75081 653 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 CILPO75339 1184 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 MCF2P10911 925 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 GOT1P17174 413 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 CD52P31358 61 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 PGGT1BP53609 377 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 EMP3P54852 163 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 LMNB2Q03252 620 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 THOC5Q13769 683 aaKnown RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 MSS51Q4VC12 460 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 C4orf50Q6ZRC1 276 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 SH3TC2Q8TF17 1288 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 PEBP4Q96S96 227 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 PARVBQ9HBI1 364 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 DDIT4Q9NX09 232 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 DDX43Q9NXZ2 648 aaKnown RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 KLHL8Q9P2G9 620 aaPredicted RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 CES2O00748 559 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 APOL1O14791 398 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 TRPA1O75762 1119 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 HAUS5O94927 633 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 SOX4Q06945 474 aaPredicted RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 LPIN1Q14693 890 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 HEATR6Q6AI08 1181 aaKnown RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 PIGZQ86VD9 579 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 KATNAL2Q8IYT4 538 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 MAML1Q92585 1016 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 B3GALT6Q96L58 329 aa12.65□□□□□ -0.38
USP11-206ENST00000469080 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.38
USP11-206ENST00000469080 IGKV6D-21A0A0A0MT36 114 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 B4GALT4O60513 344 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 ALDH2P05091 517 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 DDX5P17844 614 aaKnown RBP12.64□□□□□ -0.39
USP11-206ENST00000469080 CYP3A5P20815 502 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 BDNFP23560 247 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 CDKN2BP42772 138 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 WASHC5Q12768 1159 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 MED21Q13503 144 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 SNX17Q15036 470 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 LVRNQ6Q4G3 990 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 PALMDQ9NP74 551 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 AAASQ9NRG9 546 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 ABI2Q9NYB9 513 aaPredicted RBP12.64□□□□□ -0.39
USP11-206ENST00000469080 AP4E1Q9UPM8 1137 aa12.64□□□□□ -0.39
USP11-206ENST00000469080 KCNH4Q9UQ05 1017 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms