RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 NTSR1P30989 418 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 GALCP54803 685 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 ATP11AP98196 1134 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 TMCO4Q5TGY1 634 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 RNF219Q5W0B1 726 aaPredicted RBP11.04□□□□□ -0.64
UBR4-208ENST00000459947 EMC1Q8N766 993 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 CHFRQ96EP1 664 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 CTTNBP2NLQ9P2B4 639 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 MYO1AQ9UBC5 1043 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 PCDHGA2Q9Y5H1 932 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 HS3ST4Q9Y661 456 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 ADKP55263 362 aaKnown RBP11.04□□□□□ -0.64
UBR4-208ENST00000459947 RFFLQ8WZ73 363 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 NUP85Q9BW27 656 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 ZSCAN32Q9NX65 697 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 TAS2R14Q9NYV8 317 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 A0A0A6YYK5 440 aaPredicted RBP11.04□□□□□ -0.64
UBR4-208ENST00000459947 TSPAN3O60637 253 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 RNF40O75150 1001 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 LCA5LO95447 670 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 CARNMT1Q8N4J0 409 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 ZNF564Q8TBZ8 553 aaPredicted RBP11.04□□□□□ -0.64
UBR4-208ENST00000459947 TTC17Q96AE7 1141 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 ELOVL2Q9NXB9 296 aa11.04□□□□□ -0.64
UBR4-208ENST00000459947 RCOR3Q9P2K3 495 aaPredicted RBP11.04□□□□□ -0.64
UBR4-208ENST00000459947 THAP10Q9P2Z0 257 aaPredicted RBP11.04□□□□□ -0.64
UBR4-208ENST00000459947 OTOL1A6NHN0 477 aaPredicted RBP11.03□□□□□ -0.64
UBR4-208ENST00000459947 DCNP07585 359 aaKnown RBP11.03□□□□□ -0.64
UBR4-208ENST00000459947 HOXC13P31276 330 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 SLC6A4P31645 630 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 DPP6P42658 865 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 SLC1A1P43005 524 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 SLC6A11P48066 632 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 HCAR3P49019 387 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 SLC20A2Q08357 652 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 FZD5Q13467 585 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 CDO1Q16878 200 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 FBXL22Q6P050 247 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 WDR5BQ86VZ2 330 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 ZNF513Q8N8E2 541 aaPredicted RBP11.03□□□□□ -0.64
UBR4-208ENST00000459947 CCDC114Q96M63 670 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 SLC25A13Q9UJS0 675 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 PLA2G4CQ9UP65 541 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 ZSCAN5CA6NGD5 496 aaPredicted RBP11.03□□□□□ -0.64
UBR4-208ENST00000459947 H3BRJ5 948 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 MAGEA1P43355 309 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 HADHBP55084 474 aaKnown RBP11.03□□□□□ -0.64
UBR4-208ENST00000459947 ANGPT1Q15389 498 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 FAM131BQ86XD5 332 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 NAT16Q8N8M0 369 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 TSTD1Q8NFU3 115 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 ANAPC7Q9UJX3 599 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 TBC1D30Q9Y2I9 924 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 ILVBLA1L0T0 632 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 E9PAM4 449 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 RHOCP08134 193 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 HDAC4P56524 1084 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 PITX1P78337 314 aaPredicted RBP11.03□□□□□ -0.64
UBR4-208ENST00000459947 LONP2Q86WA8 852 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 CCAR2Q8N163 923 aaKnown RBP11.03□□□□□ -0.64
UBR4-208ENST00000459947 LZTR1Q8N653 840 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 PRICKLE1Q96MT3 831 aaPredicted RBP11.03□□□□□ -0.64
UBR4-208ENST00000459947 GABRG3Q99928 467 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 C2orf49Q9BVC5 232 aaPredicted RBP11.03□□□□□ -0.64
UBR4-208ENST00000459947 EBF1Q9UH73 591 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 FZD10Q9ULW2 581 aa11.03□□□□□ -0.64
UBR4-208ENST00000459947 WASH4PA8MWX3 477 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 K7EQS6 105 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 PLEKP08567 350 aaPredicted RBP11.02□□□□□ -0.64
UBR4-208ENST00000459947 KRT7P08729 469 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 DLDP09622 509 aaKnown RBP11.02□□□□□ -0.64
UBR4-208ENST00000459947 CD72P21854 359 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 CLCN6P51797 869 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 YBEYP58557 167 aaPredicted RBP11.02□□□□□ -0.64
UBR4-208ENST00000459947 ERMARDQ5T6L9 678 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 IER5LQ5T953 404 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 MBLAC2Q68D91 279 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 SCYL2Q6P3W7 929 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 RFWD3Q6PCD5 774 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 C12orf40Q86WS4 652 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 CASKIN2Q8WXE0 1202 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 SIK2Q9H0K1 926 aa11.02□□□□□ -0.64
UBR4-208ENST00000459947 SCAMP3O14828 347 aaKnown RBP11.02□□□□□ -0.65
UBR4-208ENST00000459947 KLF8O95600 359 aaPredicted RBP11.02□□□□□ -0.65
UBR4-208ENST00000459947 MTAPQ13126 283 aa11.02□□□□□ -0.65
UBR4-208ENST00000459947 C2CD6Q53TS8 623 aa11.02□□□□□ -0.65
UBR4-208ENST00000459947 VSIG1Q86XK7 387 aa11.02□□□□□ -0.65
UBR4-208ENST00000459947 MAP7D3Q8IWC1 876 aa11.02□□□□□ -0.65
UBR4-208ENST00000459947 RPLP0P6Q8NHW5 317 aa11.02□□□□□ -0.65
UBR4-208ENST00000459947 BAG1Q99933 345 aaPredicted RBP11.02□□□□□ -0.65
UBR4-208ENST00000459947 VANGL2Q9ULK5 521 aa11.02□□□□□ -0.65
UBR4-208ENST00000459947 MTF2Q9Y483 593 aaPredicted RBP11.02□□□□□ -0.65
UBR4-208ENST00000459947 TARSL2A2RTX5 802 aaKnown RBP11.02□□□□□ -0.65
UBR4-208ENST00000459947 SYNCRIPO60506 623 aaKnown RBP11.02□□□□□ -0.65
UBR4-208ENST00000459947 PROSCO94903 275 aa11.02□□□□□ -0.65
UBR4-208ENST00000459947 ARL4AP40617 200 aa11.02□□□□□ -0.65
UBR4-208ENST00000459947 KIR2DL1P43626 348 aaPredicted RBP11.02□□□□□ -0.65
UBR4-208ENST00000459947 GFPT1Q06210 699 aaPredicted RBP11.02□□□□□ -0.65
UBR4-208ENST00000459947 C15orf59Q2T9L4 293 aaPredicted RBP11.02□□□□□ -0.65
UBR4-208ENST00000459947 TRNP1Q6NT89 227 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms