RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 CYS1Q717R9 158 aa16.71■□□□□ 0.26
PIKFYVE-206ENST00000443896 ERP27Q96DN0 273 aa16.71■□□□□ 0.26
PIKFYVE-206ENST00000443896 SLC9A7Q96T83 725 aa16.71■□□□□ 0.26
PIKFYVE-206ENST00000443896 TRIM56Q9BRZ2 755 aaKnown RBP16.71■□□□□ 0.26
PIKFYVE-206ENST00000443896 CHST12Q9NRB3 414 aa16.71■□□□□ 0.26
PIKFYVE-206ENST00000443896 SYNJ2BP-COX16A0A087WUM0 186 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 OPHN1O60890 802 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 CSH1P0DML2 217 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 CSH2P0DML3 217 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 GNAZP19086 355 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 CLCNKBP51801 687 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 TRMT10BQ6PF06 316 aaKnown RBP16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 COLGALT1Q8NBJ5 622 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 RNF169Q8NCN4 708 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 ABTB1Q969K4 478 aaPredicted RBP16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 P2RY11Q96G91 374 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 SMOQ99835 787 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 ULBP1Q9BZM6 244 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 EIF2B3Q9NR50 452 aaKnown RBP16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 COX16Q9P0S2 106 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 SCOCQ9UIL1 159 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 C9IYK1 514 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 TNPO2O14787 897 aaKnown RBP16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 HNRNPRO43390 633 aaKnown RBP16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 CACNA2D1P54289 1103 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 AIF1P55008 147 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 GJA9P57773 515 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 DAOAP59103 153 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 NME3Q13232 169 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 PDK1Q15118 436 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 FAM35AQ86V20 835 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 IFNL1Q8IU54 200 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 MTBPQ96DY7 904 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 GBP5Q96PP8 586 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 SRPK1Q96SB4 655 aaKnown RBP16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 SENP6Q9GZR1 1112 aaPredicted RBP16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 MKS1Q9NXB0 559 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 MIOSQ9NXC5 875 aa16.7■□□□□ 0.26
PIKFYVE-206ENST00000443896 RNF103O00237 685 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 C2CD2LO14523 706 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 COPEO14579 308 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 UGT1A9O60656 530 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 RFPL1O75677 317 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 STK10O94804 968 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 RAB41Q5JT25 222 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 STEAP4Q687X5 459 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 RSPH3Q86UC2 560 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 C3orf58Q8NDZ4 430 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 ZMIZ2Q8NF64 920 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 PCED1BQ96HM7 432 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 VCXQ9H320 206 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 RMI1Q9H9A7 625 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 UGT1A7Q9HAW7 530 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 UGT1A10Q9HAW8 530 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 UGT1A8Q9HAW9 530 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 NPHS2Q9NP85 383 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 CNGB3Q9NQW8 809 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 TXLNGQ9NUQ3 528 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 MOCS1Q9NZB8 636 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 DCLK1O15075 740 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 KRT38O76015 456 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 TROVE2P10155 538 aaKnown RBP eCLIP16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 AP1B1Q10567 949 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 TSNAXIP1Q2TAA8 658 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 GNASQ5JWF2 1037 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 GDF6Q6KF10 455 aaPredicted RBP16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 CDHR3Q6ZTQ4 885 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 TRIM42Q8IWZ5 723 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 NTAN1Q96AB6 310 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 OXNAD1Q96HP4 312 aaPredicted RBP16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 WDR6Q9NNW5 1121 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 ALG13Q9NP73 1137 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 LRRC42Q9Y546 428 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 SCN10AQ9Y5Y9 1956 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 MYBPHLA2RUH7 354 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 ARL5CA6NH57 179 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 YJEFN3A6XGL0 299 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 E7ENQ6 273 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 EEF2KO00418 725 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 ATP5HO75947 161 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 CBX6O95503 412 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 CHRNA1P02708 482 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 ADRA1BP35368 520 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 SCAPQ12770 1279 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 PLEKHG4Q58EX7 1191 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 SPDYAQ5MJ70 313 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 LRRC8BQ6P9F7 803 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 GPRIN1Q7Z2K8 1008 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 FAM13CQ8NE31 585 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 SLC7A14Q8TBB6 771 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 LPPQ93052 612 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 TSSK1BQ9BXA7 367 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 SUDS3Q9H7L9 328 aaPredicted RBP16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 GIT1Q9Y2X7 761 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 PCDHGA4Q9Y5G9 962 aa16.69■□□□□ 0.26
PIKFYVE-206ENST00000443896 RABGGTBP53611 331 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 OR52E8Q6IFG1 317 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 TTC17Q96AE7 1141 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 KCNK16Q96T55 309 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms