RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 TRIM61Q5EBN2 209 aa22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 RABGAP1LQ5R372 815 aa22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 SLC23A3Q6PIS1 610 aa22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 CARNMT1Q8N4J0 409 aa22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 C18orf8Q96DM3 657 aa22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 MYEOVQ96EZ4 313 aa22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 ZNF419Q96HQ0 510 aaPredicted RBP22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 PRMT1Q99873 361 aaKnown RBP22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 WSB2Q9NYS7 404 aaPredicted RBP22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 KIAA1522Q9P206 1035 aaPredicted RBP22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 SUN2Q9UH99 717 aa22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 CNOT1A5YKK6 2376 aaKnown RBP22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 SPTBN2O15020 2390 aa22.04■■□□□ 1.12
UBE2D3-201ENST00000321805 NCOR2Q9Y618 2525 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 A0A1B0GVM2 712 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 TCAF2A6NFQ2 919 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 LRRC10BA6NIK2 292 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 LGALS16A8MUM7 142 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 H0Y626 953 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 GRAP2O75791 330 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 ACADMP11310 421 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 ITPKAP23677 461 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 COPB1P53618 953 aaKnown RBP22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 OXCT1P55809 520 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 ST8SIA6P61647 398 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 ZBTB16Q05516 673 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 DUOXA1Q1HG43 343 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 SYCP2LQ5T4T6 812 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 NOP9Q86U38 636 aaKnown RBP22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 ERICH1Q86X53 443 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 CADM4Q8NFZ8 388 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 RNF34Q969K3 372 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 ERLEC1Q96DZ1 483 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 PGAP3Q96FM1 320 aaPredicted RBP22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 HSPA12BQ96MM6 686 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 PCED1AQ9H1Q7 454 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 TMEM74BQ9NUR3 256 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 SIK3Q9Y2K2 1263 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 PAXBP1Q9Y5B6 917 aa22.03■■□□□ 1.12
UBE2D3-201ENST00000321805 PATE3B3GLJ2 98 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 SRPRAP08240 638 aaKnown RBP22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 HLA-EP13747 358 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 ZNF18P17022 549 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 CSKP41240 450 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 TPMTP51580 245 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 JAM2P57087 298 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 POLR2FP61218 127 aaKnown RBP22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 NOMO3P69849 1222 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 ARID5BQ14865 1188 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 BRMS1LQ5PSV4 323 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 ACBD5Q5T8D3 534 aaPredicted RBP22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 TAF3Q5VWG9 929 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 DAB2IPQ5VWQ8 1189 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 ARCQ7LC44 396 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 SLC41A1Q8IVJ1 513 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 CFAP52Q8N1V2 620 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 NT5C3BQ969T7 300 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 TOE1Q96GM8 510 aaKnown RBP22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 NPY6RQ99463 290 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 NUP58Q9BVL2 599 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 NAT10Q9H0A0 1025 aaKnown RBP22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 TMEM9BQ9NQ34 198 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 FAM207AQ9NSI2 230 aaPredicted RBP22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 SUSD2Q9UGT4 822 aa22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 INTS6Q9UL03 887 aaKnown RBP22.02■■□□□ 1.12
UBE2D3-201ENST00000321805 M0QYT0 321 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 F9P00740 461 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 SOX5P35711 763 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 IRX4P78413 519 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 PLEKHG6Q3KR16 790 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 FSCBQ5H9T9 825 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 PPM1JQ5JR12 505 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 PITRM1Q5JRX3 1037 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 WDR45BQ5MNZ6 344 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 XYLT1Q86Y38 959 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 MYO19Q96H55 970 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 SPAG5Q96R06 1193 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 PPP1R9BQ96SB3 815 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 CD93Q9NPY3 652 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 PRSS16Q9NQE7 514 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 NOCTQ9UK39 431 aaKnown RBP22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 SCML1Q9UN30 329 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 SLC6A14Q9UN76 642 aa22.01■■□□□ 1.11
UBE2D3-201ENST00000321805 SYNJ2BP-COX16A0A087WUM0 186 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 MMEP08473 750 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 SERPINF2P08697 491 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 CDR2Q01850 454 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 NME3Q13232 169 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 NCAPHQ15003 741 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 HNRNPA1L2Q32P51 320 aaKnown RBP22■■□□□ 1.11
UBE2D3-201ENST00000321805 FAM102AQ5T9C2 384 aaPredicted RBP22■■□□□ 1.11
UBE2D3-201ENST00000321805 TRIM72Q6ZMU5 477 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 SND1Q7KZF4 910 aaKnown RBP eCLIP22■■□□□ 1.113e-6■□□□□ 8.1
UBE2D3-201ENST00000321805 CCAR2Q8N163 923 aaKnown RBP22■■□□□ 1.11
UBE2D3-201ENST00000321805 ERGIC2Q96RQ1 377 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 COX16Q9P0S2 106 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 ITIH6Q6UXX5 1313 aa22■■□□□ 1.11
UBE2D3-201ENST00000321805 ATXN2Q99700 1313 aaKnown RBP22■■□□□ 1.11
UBE2D3-201ENST00000321805 CACNA1EQ15878 2313 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms