RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PPP4R1Q8TF05 950 aa15.64■□□□□ 0.09
DDX56-201ENST00000258772 KATNBL1Q9H079 304 aa15.64■□□□□ 0.09
DDX56-201ENST00000258772 FAM49AQ9H0Q0 323 aaPredicted RBP15.64■□□□□ 0.09
DDX56-201ENST00000258772 GPAMQ9HCL2 828 aa15.64■□□□□ 0.09
DDX56-201ENST00000258772 GDAP2Q9NXN4 497 aa15.64■□□□□ 0.09
DDX56-201ENST00000258772 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.64■□□□□ 0.09
DDX56-201ENST00000258772 TXNDC16Q9P2K2 825 aa15.64■□□□□ 0.09
DDX56-201ENST00000258772 RPS6KL1Q9Y6S9 549 aa15.64■□□□□ 0.09
DDX56-201ENST00000258772 PDCD11Q14690 1871 aaKnown RBP15.64■□□□□ 0.09
DDX56-201ENST00000258772 SYNJ2BP-COX16A0A087WUM0 186 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 CCDC189A1A4V9 331 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 MEI4A8MW99 385 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 XPO1O14980 1071 aaKnown RBP15.63■□□□□ 0.09
DDX56-201ENST00000258772 CREB3O43889 395 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 SIN3BO75182 1162 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 GPR32O75388 356 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 TKTP29401 623 aaKnown RBP15.63■□□□□ 0.09
DDX56-201ENST00000258772 GP5P40197 560 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 ADIGQ0VDE8 80 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 TMCO4Q5TGY1 634 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 OTUD1Q5VV17 481 aaPredicted RBP15.63■□□□□ 0.09
DDX56-201ENST00000258772 NME8Q8N427 588 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 NLGN2Q8NFZ4 835 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 NT5C3BQ969T7 300 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 CERS2Q96G23 380 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 TTC1Q99614 292 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 FAM96AQ9H5X1 160 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 DNAJC28Q9NX36 388 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 COX16Q9P0S2 106 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 IGSF9Q9P2J2 1179 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 SF3B1O75533 1304 aaKnown RBP eCLIP15.63■□□□□ 0.095e-6■■■■■ 61.3
DDX56-201ENST00000258772 SMIM28A0A1B0GU29 152 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 ZNF195O14628 629 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 SNAI1O95863 264 aaPredicted RBP15.63■□□□□ 0.09
DDX56-201ENST00000258772 CD4P01730 458 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 RALBP11234 206 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 IDH3AP50213 366 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 HIC1Q14526 733 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 GRTP1Q5TC63 336 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 PID1Q7Z2X4 250 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 TP53INP2Q8IXH6 220 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 POU5F2Q8N7G0 328 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 APPL2Q8NEU8 664 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 GATA6Q92908 595 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 FCRL3Q96P31 734 aaPredicted RBP15.63■□□□□ 0.09
DDX56-201ENST00000258772 CPNE1Q99829 537 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 ZNF358Q9NW07 568 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 SCOCQ9UIL1 159 aa15.63■□□□□ 0.09
DDX56-201ENST00000258772 PPP1R12AO14974 1030 aaPredicted RBP15.62■□□□□ 0.09
DDX56-201ENST00000258772 DAB1O75553 588 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 MMP3P08254 477 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 ALOX15P16050 662 aaPredicted RBP15.62■□□□□ 0.09
DDX56-201ENST00000258772 NOS2P35228 1153 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 GMPRP36959 345 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 PEX19P40855 299 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 ABCE1P61221 599 aaKnown RBP15.62■□□□□ 0.09
DDX56-201ENST00000258772 IFRD2Q12894 506 aaPredicted RBP15.62■□□□□ 0.09
DDX56-201ENST00000258772 PAFAH1B3Q15102 231 aaKnown RBP15.62■□□□□ 0.09
DDX56-201ENST00000258772 SPANXN3Q5MJ09 141 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 OR52E8Q6IFG1 317 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 BNIPLQ7Z465 357 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 SLC25A41Q8N5S1 370 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 GSTCDQ8NEC7 633 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 NPY6RQ99463 290 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 OSMRQ99650 979 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 NDE1Q9NXR1 346 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 DDX43Q9NXZ2 648 aaKnown RBP15.62■□□□□ 0.09
DDX56-201ENST00000258772 KLK14Q9P0G3 267 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 ARHGAP42A6NI28 874 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 ADCY6O43306 1168 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 FKBP6O75344 327 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 BAG2O95816 211 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 MYL4P12829 197 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 MX2P20592 715 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 GARSP41250 739 aaKnown RBP15.62■□□□□ 0.09
DDX56-201ENST00000258772 HARS2P49590 506 aaKnown RBP15.62■□□□□ 0.09
DDX56-201ENST00000258772 OLIG2Q13516 323 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 ITGA9Q13797 1035 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 DPYSQ14117 519 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 LIMS2Q7Z4I7 341 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 CMC1Q7Z7K0 106 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 RSPH3Q86UC2 560 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 GPRC5AQ8NFJ5 357 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 SHKBP1Q8TBC3 707 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 TNIP3Q96KP6 325 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 ZNF560Q96MR9 790 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 SGIP1Q9BQI5 828 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 DUSP16Q9BY84 665 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 PPM1HQ9ULR3 514 aa15.62■□□□□ 0.09
DDX56-201ENST00000258772 MAGEA13PA6NCF6 341 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 M0QYT0 321 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 HOXD8P13378 290 aaPredicted RBP15.61■□□□□ 0.09
DDX56-201ENST00000258772 CPA3P15088 417 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 SMPD1P17405 629 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 PSEN1P49768 467 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 TAF6P49848 677 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 COPAP53621 1224 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 CCDC153Q494R4 210 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 RALGPS1Q5JS13 557 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 SYPL2Q5VXT5 272 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms