RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	CDC25B	P30305	580 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CORO1A	P31146	461 aa	Known RBP	10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	GTF2H1	P32780	548 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	PIK3CA	P42336	1068 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	PLA2G4A	P47712	749 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	KIF11	P52732	1056 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	AP3M2	P53677	418 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	ENPEP	Q07075	957 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CYP4F3	Q08477	520 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	EFEMP1	Q12805	493 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	ZACN	Q401N2	412 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CBWD6	Q4V339	395 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CCDC157	Q569K6	752 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CBWD3	Q5JTY5	395 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CBWD5	Q5RIA9	395 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	C1orf220	Q5T0J3	134 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	KRT39	Q6A163	491 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	KLHDC10	Q6PID8	442 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	SV2A	Q7L0J3	742 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	METTL3	Q86U44	580 aa	Known RBP	10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	VSTM4	Q8IW00	320 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CADM4	Q8NFZ8	388 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	RHBDD1	Q8TEB9	315 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	PRCC	Q92733	491 aa	Predicted RBP	10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CYFIP2	Q96F07	1278 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	PIWIL1	Q96J94	861 aa	Known RBP	10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	HNRNPAB	Q99729	332 aa	Known RBP	10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CIPC	Q9C0C6	399 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	APOBEC3G	Q9HC16	384 aa	Known RBP	10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	SLC27A6	Q9Y2P4	619 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	SNX11	Q9Y5W9	270 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587		A0A1W2PQC6	194 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	P4HA2	O15460	535 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	SYNCRIP	O60506	623 aa	Known RBP	10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	DKK1	O94907	266 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	ASS1	P00966	412 aa	Known RBP	10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	IGLV3-19	P01714	112 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	PRB1	P04280	392 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	EPHX1	P07099	455 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	ZNF883	P0CG24	379 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	ACADM	P11310	421 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	CD58	P19256	250 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	ACSL1	P33121	698 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	KLK7	P49862	253 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	CLDN6	P56747	220 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	IL9R	Q01113	521 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	CCDC173	Q0VFZ6	552 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	CAMK2B	Q13554	666 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	EXOC3L4	Q17RC7	722 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	SGSM1	Q2NKQ1	1148 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	KIF19	Q2TAC6	998 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	KCNT1	Q5JUK3	1230 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	SPECC1L	Q69YQ0	1117 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	CCDC186	Q7Z3E2	898 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	ANKS1B	Q7Z6G8	1248 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	UNC93A	Q86WB7	457 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	DENND1C	Q8IV53	801 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	NEK11	Q8NG66	645 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	CYB5D2	Q8WUJ1	264 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	ERGIC2	Q96RQ1	377 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	INTS2	Q9H0H0	1204 aa	Known RBP	10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	ELOVL2	Q9NXB9	296 aa		10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	AGO1	Q9UL18	857 aa	Known RBP	10.46	□□□□□ -0.73
PHGDH-222	ENST00000641587	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.46	□□□□□ -0.73	1e-6	■□□□□ 10.9
PHGDH-222	ENST00000641587	PLXNA2	O75051	1894 aa		10.46	□□□□□ -0.74
PHGDH-222	ENST00000641587	GCN1	Q92616	2671 aa	Known RBP	10.46	□□□□□ -0.74
PHGDH-222	ENST00000641587	ITIH6	Q6UXX5	1313 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	GTPBP10	A4D1E9	387 aa	Known RBP	10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	TRABD2B	A6NFA1	517 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	FLRT2	O43155	660 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	TSPAN3	O60637	253 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	P4HA1	P13674	534 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	TRIM21	P19474	475 aa	Known RBP	10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	INCA1	Q0VD86	236 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	LRMP	Q12912	555 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	ZNF394	Q53GI3	561 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	DHRS13	Q6UX07	377 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	SERPINA13P	Q6UXR4	307 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	DBX2	Q6ZNG2	339 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	CCDC150	Q8NCX0	1101 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	FBXL13	Q8NEE6	735 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	TAS1R2	Q8TE23	839 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	UCMA	Q8WVF2	138 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	NDRG1	Q92597	394 aa	Known RBP	10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	NUP58	Q9BVL2	599 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	NT5C1A	Q9BXI3	368 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	IMPG2	Q9BZV3	1241 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	LHX5	Q9H2C1	402 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	TM9SF3	Q9HD45	589 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	SCUBE2	Q9NQ36	999 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	SIK3	Q9Y2K2	1263 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	USP3	Q9Y6I4	520 aa		10.45	□□□□□ -0.74
PHGDH-222	ENST00000641587	SLC12A8	A0AV02	714 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587		H0Y8X5	98 aa		10.44	□□□□□ -0.74
PHGDH-222	ENST00000641587	CBX4	O00257	560 aa		10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms