RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GOLGA7BQ2TAP0 167 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 FMNL3Q8IVF7 1028 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 SCML4Q8N228 414 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 WFIKKN2Q8TEU8 576 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 KCTD13Q8WZ19 329 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 MIR1-1HGQ9H1L0 117 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 TMEM245Q9H330 911 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 LRRC4Q9HBW1 653 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 FANCLQ9NW38 375 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 APEX2Q9UBZ4 518 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 PCOLCE2Q9UKZ9 415 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 CACNA1EQ15878 2313 aa18.27■□□□□ 0.51
SHKBP1-203ENST00000594298 ZZEF1O43149 2961 aa18.27■□□□□ 0.51
SHKBP1-203ENST00000594298 WDFY3Q8IZQ1 3526 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 IGF2RP11717 2491 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 SMTNL1A8MU46 457 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 CER1O95813 267 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 CDK11BP21127 795 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 PON1P27169 355 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 MATKP42679 507 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 ADGRF1Q5T601 910 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 CDKAL1Q5VV42 579 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 BSPRYQ5W0U4 402 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 DBX2Q6ZNG2 339 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 KIAA0907Q7Z7F0 614 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 PROSER1Q86XN7 944 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 RNF139Q8WU17 664 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 NDRG1Q92597 394 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 KAT5Q92993 513 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 GAREM1Q9H706 876 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 IL21RQ9HBE5 538 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 APOBEC2Q9Y235 224 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 PCDHGB2Q9Y5G2 931 aa18.26■□□□□ 0.51
SHKBP1-203ENST00000594298 YJEFN3A6XGL0 299 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 E7ENQ6 273 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 TAF4O00268 1085 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 KRT5P13647 590 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 BNC1Q01954 994 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 RING1Q06587 406 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 ADIGQ0VDE8 80 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 CNGA2Q16280 664 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 ANO6Q4KMQ2 910 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 MIIPQ5JXC2 388 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 FKBP15Q5T1M5 1219 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 ADIPOR2Q86V24 386 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 TMA16Q96EY4 203 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 KREMEN1Q96MU8 473 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 BPIFA3Q9BQP9 254 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 IRX2Q9BZI1 471 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 LHX5Q9H2C1 402 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 FBRSQ9HAH7 460 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 OSGEPQ9NPF4 335 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 CNGB3Q9NQW8 809 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 TM7SF3Q9NS93 570 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 ABCC13Q9NSE7 274 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 KIAA1522Q9P206 1035 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 SFMBT1Q9UHJ3 866 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 EIF2B4Q9UI10 523 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 PLA2G4CQ9UP65 541 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 CNTN6Q9UQ52 1028 aa18.25■□□□□ 0.51
SHKBP1-203ENST00000594298 O00370 1275 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 SETSIPP0DME0 302 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 HLA-EP13747 358 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 ZBTB16Q05516 673 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 PTPRNQ16849 979 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 HLA-BQ31612 363 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 PKDCCQ504Y2 493 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 MPP7Q5T2T1 576 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 LRSAM1Q6UWE0 723 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 LCLAT1Q6UWP7 414 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 CCNI2Q6ZMN8 369 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 CACUL1Q86Y37 369 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 AHI1Q8N157 1196 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 SIX6OS1Q8N1H7 587 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 BAHD1Q8TBE0 780 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 EDEM1Q92611 657 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 TAB2Q9NYJ8 693 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 FNDC3AQ9Y2H6 1198 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 FAM208BQ5VWN6 2430 aa18.24■□□□□ 0.51
SHKBP1-203ENST00000594298 AKAP13Q12802 2813 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 RNF225M0QZC1 329 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 MED7O43513 233 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 TSPAN3O60637 253 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 IGLV3-27P01718 113 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 PABPC1P11940 636 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 AFF3P51826 1226 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 SCAPQ12770 1279 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 KRT31Q15323 416 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 ARHGAP44Q17R89 818 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 FNDC3BQ53EP0 1204 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 MSANTD2Q6P1R3 559 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 CHST9Q7L1S5 443 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 SLCO6A1Q86UG4 719 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 FAM124AQ86V42 546 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 PNPLA1Q8N8W4 532 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 UBA3Q8TBC4 463 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 SETD7Q8WTS6 366 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 CYB5D2Q8WUJ1 264 aa18.23■□□□□ 0.51
SHKBP1-203ENST00000594298 VPS16Q9H269 839 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms