RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ZNF761Q86XN6 746 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-203ENST00000585448 COL23A1Q86Y22 540 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-203ENST00000585448 THNSL2Q86YJ6 484 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 CPSF7Q8N684 471 aaKnown RBP6.33□□□□□ -1.4
SMAD4-203ENST00000585448 NECAB1Q8N987 351 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 RNF169Q8NCN4 708 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 EXD1Q8NHP7 514 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 CHPT1Q8WUD6 406 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 STMN2Q93045 179 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 MAGOHBQ96A72 148 aaKnown RBP6.33□□□□□ -1.4
SMAD4-203ENST00000585448 NRBF2Q96F24 287 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 PGM2Q96G03 612 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 DYDC2Q96IM9 177 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 PRICKLE1Q96MT3 831 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-203ENST00000585448 MRPS26Q9BYN8 205 aaKnown RBP6.33□□□□□ -1.4
SMAD4-203ENST00000585448 CCSER1Q9C0I3 900 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 ISCUQ9H1K1 167 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 USP29Q9HBJ7 922 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 ABHD10Q9NUJ1 306 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 ARHGAP20Q9P2F6 1191 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 RBPJLQ9UBG7 517 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 TBK1Q9UHD2 729 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 GNPTGQ9UJJ9 305 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 DNAJC12Q9UKB3 198 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 PADI4Q9UM07 663 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 NFU1Q9UMS0 254 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 DNM3Q9UQ16 869 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 B3GNT3Q9Y2A9 372 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 UTP11Q9Y3A2 253 aaKnown RBP6.33□□□□□ -1.4
SMAD4-203ENST00000585448 PCDHB6Q9Y5E3 794 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 HMGXB3Q12766 1538 aa6.33□□□□□ -1.4
SMAD4-203ENST00000585448 A0A1W2PP64 1363 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 USP32Q8NFA0 1604 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 SBNO2Q9Y2G9 1366 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ACEP12821 1306 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 NEDD4P46934 1319 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 TRIM64A6NGJ6 449 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 PRAMEF25A6NGN4 478 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 TRIM64BA6NI03 449 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 HNRNPCL2B2RXH8 293 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 H7C1D1 291 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 DVL2O14641 736 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 FOXP2O15409 715 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 AQP9O43315 295 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 GPC4O75487 556 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 SEC24DO94855 1032 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 HEXIM1O94992 359 aaKnown RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 PSMG1O95456 288 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 MPIG6BO95866 241 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 OLFM2O95897 454 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 AGTP01019 485 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 KNG1P01042 644 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 TFRCP02786 760 aaKnown RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ITGB3P05106 788 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ALOX5P09917 674 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 P4HA1P13674 534 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 MYL6BP14649 208 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 GLULP15104 373 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 CHN1P15882 459 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 PTPN4P29074 926 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 KCNC1P48547 511 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 POLD2P49005 469 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 CENPAP49450 140 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ALDH18A1P54886 795 aaKnown RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 GNG2P59768 71 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 IRX4P78413 519 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 S100A12P80511 92 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 PPP2R2BQ00005 443 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 TFAP4Q01664 338 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 UBXN1Q04323 297 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 GBE1Q04446 702 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 FCHO2Q0JRZ9 810 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 MED21Q13503 144 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 GNA13Q14344 377 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 KRT32Q14532 448 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 UBE3CQ15386 1083 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 KCNJ8Q15842 424 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ZNF829Q3KNS6 432 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 CATSPEREQ5SY80 951 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 BEND3Q5T5X7 828 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 PKN3Q6P5Z2 889 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 KLHDC10Q6PID8 442 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 CORO6Q6QEF8 472 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 BLOC1S2Q6QNY1 142 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 DPP8Q6V1X1 898 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 RBM44Q6ZP01 1051 aaKnown RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 IDO2Q6ZQW0 420 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 C4orf50Q6ZRC1 276 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 DCDC5Q6ZRR9 648 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 CYP4V2Q6ZWL3 525 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 PEX26Q7Z412 305 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ADGRG6Q86SQ4 1221 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 RNF180Q86T96 592 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 NME9Q86XW9 330 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 AADATQ8N5Z0 425 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 EFHBQ8N7U6 833 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ADAMTS17Q8TE56 1095 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 PRPF31Q8WWY3 499 aaKnown RBP6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ASB15Q8WXK1 588 aa6.32□□□□□ -1.4
SMAD4-203ENST00000585448 ZCCHC14Q8WYQ9 949 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms