RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 TPGS1Q6ZTW0 290 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 CYP4V2Q6ZWL3 525 aaPredicted RBP11.99□□□□□ -0.49
YBX3-213ENST00000542641 PEX26Q7Z412 305 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 TMEM25Q86YD3 366 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 PSTKQ8IV42 348 aaKnown RBP11.99□□□□□ -0.49
YBX3-213ENST00000542641 FAM217AQ8IXS0 508 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 LGI2Q8N0V4 545 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 GJD3Q8N144 294 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 PYROXD2Q8N2H3 581 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 CPXM2Q8N436 756 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 TEKT4Q8WW24 435 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 TMA16Q96EY4 203 aaKnown RBP11.99□□□□□ -0.49
YBX3-213ENST00000542641 PRMT1Q99873 361 aaKnown RBP11.99□□□□□ -0.49
YBX3-213ENST00000542641 MAGEB5Q9BZ81 275 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 IRX2Q9BZI1 471 aaPredicted RBP11.99□□□□□ -0.49
YBX3-213ENST00000542641 DHX35Q9H5Z1 703 aaKnown RBP11.99□□□□□ -0.49
YBX3-213ENST00000542641 SPHK2Q9NRA0 654 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 GPATCH2LQ9NWQ4 482 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 AMFRQ9UKV5 643 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 VANGL2Q9ULK5 521 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 FAM72CH0Y354 149 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 NARSO43776 548 aaKnown RBP11.98□□□□□ -0.49
YBX3-213ENST00000542641 CREB3O43889 395 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 KIF5CO60282 957 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 FTCDO95954 541 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 ADH1CP00326 375 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 CYBBP04839 570 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 NR1H3Q13133 447 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 RUNX3Q13761 415 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 DHCR24Q15392 516 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 CA9Q16790 459 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 ITPRIPL2Q3MIP1 535 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 ATP13A4Q4VNC1 1196 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 RABGAP1LQ5R372 815 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 LY6G5CQ5SRR4 150 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 FAM72AQ5TYM5 149 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 FAM72DQ6L9T8 149 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 FBXL22Q6P050 247 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 RHBDF2Q6PJF5 856 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 POLNQ7Z5Q5 900 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 C14orf80Q86SX3 495 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 NT5DC3Q86UY8 548 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 FAM72BQ86X60 149 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 RNF135Q8IUD6 432 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 CPA6Q8N4T0 437 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 KCTD6Q8NC69 237 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 TRIM58Q8NG06 486 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 TTC8Q8TAM2 541 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 CSGALNACT1Q8TDX6 532 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 DDI1Q8WTU0 396 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 BHMTQ93088 406 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 RPRD1AQ96P16 312 aaPredicted RBP11.98□□□□□ -0.49
YBX3-213ENST00000542641 EPAS1Q99814 870 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 BBS2Q9BXC9 721 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 ECT2Q9H8V3 914 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 HPS4Q9NQG7 708 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 KCND1Q9NSA2 647 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.98□□□□□ -0.49
YBX3-213ENST00000542641 GTSE1Q9NYZ3 720 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 SORCS3Q9UPU3 1222 aa11.98□□□□□ -0.49
YBX3-213ENST00000542641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
YBX3-213ENST00000542641 HELZP42694 1942 aaKnown RBP11.98□□□□□ -0.49
YBX3-213ENST00000542641 TYW5A2RUC4 315 aaKnown RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 C2orf72A6NCS6 295 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 OTOL1A6NHN0 477 aaPredicted RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 E9PAM4 449 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 ARNTLO00327 626 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 GFRA2O00451 464 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 PSTPIP1O43586 416 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 TBL1XO60907 577 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 CYP17A1P05093 508 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 SRFP11831 508 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 L1CAMP32004 1257 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 RPS24P62847 133 aaKnown RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 PFKPQ01813 784 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 NRG1Q02297 640 aaPredicted RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 GAD2Q05329 585 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 KRT81Q14533 505 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 DPYSL2Q16555 572 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 ODF2Q5BJF6 829 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 PPP6R3Q5H9R7 873 aaPredicted RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 RWDD4Q6NW29 188 aaKnown RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 CFAP52Q8N1V2 620 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 C17orf53Q8N3J3 647 aaPredicted RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 HJURPQ8NCD3 748 aaPredicted RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 CD101Q93033 1021 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 IGSF8Q969P0 613 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 MYEOVQ96EZ4 313 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 NECAB3Q96P71 396 aaPredicted RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 KCTD15Q96SI1 283 aaPredicted RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 KLHL11Q9NVR0 708 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 DDX56Q9NY93 547 aaKnown RBP11.97□□□□□ -0.49
YBX3-213ENST00000542641 ZKSCAN5Q9Y2L8 839 aa11.97□□□□□ -0.49
YBX3-213ENST00000542641 CCDC66A2RUB6 948 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 DRGXA6NNA5 263 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 MIF4GDA9UHW6 222 aaKnown RBP11.96□□□□□ -0.49
YBX3-213ENST00000542641 NEDD8-MDP1E9PL57 170 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 DAPK3O43293 454 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 LRIG2O94898 1065 aa11.96□□□□□ -0.49
YBX3-213ENST00000542641 ADH5P11766 374 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms