RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 FAM172AQ8WUF8 416 aa12.96□□□□□ -0.33
CYB561A3-213ENST00000539890 NT5C3BQ969T7 300 aa12.96□□□□□ -0.33
CYB561A3-213ENST00000539890 FAM122AQ96E09 287 aa12.96□□□□□ -0.33
CYB561A3-213ENST00000539890 KIAA1522Q9P206 1035 aaPredicted RBP12.96□□□□□ -0.33
CYB561A3-213ENST00000539890 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
CYB561A3-213ENST00000539890 XPO7Q9UIA9 1087 aaKnown RBP12.96□□□□□ -0.33
CYB561A3-213ENST00000539890 VANGL2Q9ULK5 521 aa12.96□□□□□ -0.33
CYB561A3-213ENST00000539890 SLC27A6Q9Y2P4 619 aa12.96□□□□□ -0.33
CYB561A3-213ENST00000539890 COL4A3Q01955 1670 aa12.96□□□□□ -0.34
CYB561A3-213ENST00000539890 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 NPC1O15118 1278 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 SYNCRIPO60506 623 aaKnown RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 RNF8O76064 485 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ADCY5O95622 1261 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 CISD3P0C7P0 127 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 PSMA2P25787 234 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 HOXD9P28356 352 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 NTSR1P30989 418 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 PTPN9P43378 593 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 DGKEP52429 567 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ZNF143P52747 638 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ST8SIA6P61647 398 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 RPS24P62847 133 aaKnown RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ZNF177Q13360 481 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 MAMLD1Q13495 774 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 AUHQ13825 339 aaKnown RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 GAS6Q14393 721 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 EIF4HQ15056 248 aaKnown RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 C15orf59Q2T9L4 293 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 CCDC14Q49A88 953 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 RNF219Q5W0B1 726 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 E4F1Q66K89 784 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 HGSNATQ68CP4 663 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ALKBH5Q6P6C2 394 aaKnown RBP12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 CHST9Q7L1S5 443 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 STRADAQ7RTN6 431 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 AHI1Q8N157 1196 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 CAMKK1Q8N5S9 505 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 C1orf74Q96LT6 269 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 HAPLN3Q96S86 360 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 CNPY3Q9BT09 278 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 SYT11Q9BT88 431 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ABHD10Q9NUJ1 306 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ABCB8Q9NUT2 735 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ZSCAN32Q9NX65 697 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ELOVL2Q9NXB9 296 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 ARHGEF38Q9NXL2 777 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 GGA2Q9UJY4 613 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 FBXO10Q9UK96 956 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 STARD13Q9Y3M8 1113 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 HS3ST4Q9Y661 456 aa12.95□□□□□ -0.34
CYB561A3-213ENST00000539890 PRRT4C9JH25 899 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 MFAP3LO75121 409 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 LUC7L3O95232 432 aaKnown RBP12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 APBB3O95704 486 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 PLEKP08567 350 aaPredicted RBP12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 PABPC1P11940 636 aaKnown RBP12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 TFE3P19532 575 aaPredicted RBP12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 HNRNPH3P31942 346 aaKnown RBP12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 NNMTP40261 264 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 ZNF75DP51815 510 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 EIF4EBP2Q13542 120 aaPredicted RBP12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 STARD3Q14849 445 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 EFHC2Q5JST6 749 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 FBXL22Q6P050 247 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 SLFN11Q7Z7L1 901 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 FIBINQ8TAL6 211 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 MRFAP1L1Q96HT8 127 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 DNAJC7Q99615 494 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 NCAPGQ9BPX3 1015 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 ISCUQ9H1K1 167 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 PRMT8Q9NR22 394 aaPredicted RBP12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 FAM86C1Q9NVL1 165 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 RAB23Q9ULC3 237 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 MMP17Q9ULZ9 603 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 PCDHGA2Q9Y5H1 932 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 MIA3Q5JRA6 1907 aa12.94□□□□□ -0.34
CYB561A3-213ENST00000539890 KIF26AQ9ULI4 1882 aaPredicted RBP12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 A0A087X0T9 212 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 A0A1B0GVM2 712 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 TCAF2A6NFQ2 919 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 CLDN11O75508 207 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 ENDOD1O94919 500 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 FAM228BP0C875 321 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 HOXB2P14652 356 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 HLA-FP30511 346 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 ADRA1BP35368 520 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 WASP42768 502 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 KIR2DL1P43626 348 aaPredicted RBP12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 SGSHP51688 502 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 ATXN1P54253 815 aaKnown RBP12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 CDH4P55283 916 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 RPL7AP62424 266 aaKnown RBP12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 NHLH1Q02575 133 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 GFPT1Q06210 699 aaPredicted RBP12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 MESP2Q0VG99 397 aa12.93□□□□□ -0.34
CYB561A3-213ENST00000539890 GEN1Q17RS7 908 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms