RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 OTOL1A6NHN0 477 aaPredicted RBP15.46■□□□□ 0.07
NUP54-213ENST00000513352 E9PAM4 449 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 ARNTLO00327 626 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 PALMO75781 387 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 TYRP14679 529 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 IL1R2P27930 398 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 SGSHP51688 502 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 TAS2R40P59535 323 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 RPS24P62847 133 aaKnown RBP15.46■□□□□ 0.07
NUP54-213ENST00000513352 SLC25A11Q02978 314 aaKnown RBP15.46■□□□□ 0.07
NUP54-213ENST00000513352 SCAPQ12770 1279 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 KRT81Q14533 505 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 ODF2Q5BJF6 829 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 PPP6R3Q5H9R7 873 aaPredicted RBP15.46■□□□□ 0.07
NUP54-213ENST00000513352 ACBD5Q5T8D3 534 aaPredicted RBP15.46■□□□□ 0.07
NUP54-213ENST00000513352 TXNRD3NBQ6F5E7 133 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 FBXL22Q6P050 247 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 C14orf80Q86SX3 495 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 CCDC117Q8IWD4 279 aaPredicted RBP15.46■□□□□ 0.07
NUP54-213ENST00000513352 UBALD2Q8IYN6 164 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 NAT16Q8N8M0 369 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 KIAA1524Q8TCG1 905 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 MYEOVQ96EZ4 313 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 ALS2CR12Q96Q35 445 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 EPAS1Q99814 870 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 PRMT1Q99873 361 aaKnown RBP15.46■□□□□ 0.07
NUP54-213ENST00000513352 MAGEB5Q9BZ81 275 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.46■□□□□ 0.07
NUP54-213ENST00000513352 KLHL11Q9NVR0 708 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 OR12D3Q9UGF7 316 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 ALG6Q9Y672 507 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 PIAS3Q9Y6X2 628 aa15.46■□□□□ 0.07
NUP54-213ENST00000513352 COL4A3Q01955 1670 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 HOXC11O43248 304 aaPredicted RBP15.45■□□□□ 0.06
NUP54-213ENST00000513352 FTCDO95954 541 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 KRT7P08729 469 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 RARAP10276 462 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 MLLT6P55198 1093 aaPredicted RBP15.45■□□□□ 0.06
NUP54-213ENST00000513352 CA9Q16790 459 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 SLC44A4Q53GD3 710 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 BOLA3Q53S33 107 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 TPRG1Q6ZUI0 275 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 CYP4V2Q6ZWL3 525 aaPredicted RBP15.45■□□□□ 0.06
NUP54-213ENST00000513352 SYCE1Q8N0S2 351 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 CARNMT1Q8N4J0 409 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 RNF10Q8N5U6 811 aaKnown RBP15.45■□□□□ 0.06
NUP54-213ENST00000513352 TEKT4Q8WW24 435 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 TBC1D31Q96DN5 1066 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 XPO6Q96QU8 1125 aaKnown RBP15.45■□□□□ 0.06
NUP54-213ENST00000513352 KCTD15Q96SI1 283 aaPredicted RBP15.45■□□□□ 0.06
NUP54-213ENST00000513352 OSBPL2Q9H1P3 480 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 C8orf33Q9H7E9 229 aaPredicted RBP15.45■□□□□ 0.06
NUP54-213ENST00000513352 TRPV5Q9NQA5 729 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 DNAJC17Q9NVM6 304 aaKnown RBP15.45■□□□□ 0.06
NUP54-213ENST00000513352 CAPN6Q9Y6Q1 641 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 COL4A2P08572 1712 aa15.45■□□□□ 0.06
NUP54-213ENST00000513352 SPECC1L-ADORA2AF8WAN1 911 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 FAM72CH0Y354 149 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 EEF2KO00418 725 aaKnown RBP15.44■□□□□ 0.06
NUP54-213ENST00000513352 DAPK3O43293 454 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 KRT1P04264 644 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 GJA4P35212 333 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 ARL4AP40617 200 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 CDH6P55285 790 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 TPI1P60174 286 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 AMPD2Q01433 879 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 KDSRQ06136 332 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 CDH18Q13634 790 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 MLF2Q15773 248 aaPredicted RBP15.44■□□□□ 0.06
NUP54-213ENST00000513352 FAM72AQ5TYM5 149 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 TTC39BQ5VTQ0 682 aaPredicted RBP15.44■□□□□ 0.06
NUP54-213ENST00000513352 FYB2Q5VWT5 728 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 FAM72DQ6L9T8 149 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 ZNF662Q6ZS27 426 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 PEX26Q7Z412 305 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 TFAP2DQ7Z6R9 452 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 FAM72BQ86X60 149 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 PSTKQ8IV42 348 aaKnown RBP15.44■□□□□ 0.06
NUP54-213ENST00000513352 RHOT1Q8IXI2 618 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 SIX5Q8N196 739 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 KCTD6Q8NC69 237 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 IGSF8Q969P0 613 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 C1orf74Q96LT6 269 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 ARHGEF3Q9NR81 526 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 MPP6Q9NZW5 540 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 MARK1Q9P0L2 795 aa15.44■□□□□ 0.06
NUP54-213ENST00000513352 NCOR1O75376 2440 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 H0Y626 953 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 H3BRJ5 948 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 STK25O00506 426 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 DCXO43602 365 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 LRIG2O94898 1065 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 PENKP01210 267 aaPredicted RBP15.43■□□□□ 0.06
NUP54-213ENST00000513352 HOXD9P28356 352 aaPredicted RBP15.43■□□□□ 0.06
NUP54-213ENST00000513352 EPHB2P29323 1055 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 L1CAMP32004 1257 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 CTHP32929 405 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 DNA2P51530 1060 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 IRAK1P51617 712 aa15.43■□□□□ 0.06
NUP54-213ENST00000513352 ZXDAP98168 799 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms