RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 TAF1BQ53T94 588 aaPredicted RBP15.22■□□□□ 0.03
CHTOP-206ENST00000495554 MDH1BQ5I0G3 518 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 SYPL2Q5VXT5 272 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 MTDHQ86UE4 582 aaKnown RBP15.22■□□□□ 0.03
CHTOP-206ENST00000495554 TRIM42Q8IWZ5 723 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 RFWD2Q8NHY2 731 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 P2RY11Q96G91 374 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 CRTAC1Q9NQ79 661 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 SAR1AQ9NR31 198 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 DDX43Q9NXZ2 648 aaKnown RBP15.22■□□□□ 0.03
CHTOP-206ENST00000495554 SYNJ2BP-COX16A0A087WUM0 186 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 A0A0G2JND7 137 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 SDR42E2A6NKP2 422 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 RNF103O00237 685 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 CREB3O43889 395 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 UGT1A9O60656 530 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 THP07101 528 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 ASGR1P07306 291 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 T-ENOLP0DO92 83 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 CNTFP26441 200 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 AIF1P55008 147 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 MAP3K7CLP57077 242 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 PRKCZQ05513 592 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 NME3Q13232 169 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 PAFAH1B3Q15102 231 aaKnown RBP15.22■□□□□ 0.03
CHTOP-206ENST00000495554 STEAP4Q687X5 459 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 LRRC8BQ6P9F7 803 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 CLNKQ7Z7G1 428 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 RSPH3Q86UC2 560 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 CCNJLQ8IV13 435 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 DEPDC1BQ8WUY9 529 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 OXNAD1Q96HP4 312 aaPredicted RBP15.22■□□□□ 0.03
CHTOP-206ENST00000495554 PAAF1Q9BRP4 392 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 TRIM56Q9BRZ2 755 aaKnown RBP15.22■□□□□ 0.03
CHTOP-206ENST00000495554 UGT1A7Q9HAW7 530 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 UGT1A10Q9HAW8 530 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 UGT1A8Q9HAW9 530 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 KRT82Q9NSB4 513 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 COX16Q9P0S2 106 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 MTO1Q9Y2Z2 717 aaKnown RBP15.22■□□□□ 0.03
CHTOP-206ENST00000495554 NR2E3Q9Y5X4 410 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 ARL5CA6NH57 179 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 HNRNPCL1O60812 293 aaKnown RBP15.21■□□□□ 0.03
CHTOP-206ENST00000495554 ZNF189O75820 626 aaPredicted RBP15.21■□□□□ 0.03
CHTOP-206ENST00000495554 ALDH1A2O94788 518 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 LHX1P48742 406 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 BMPR2Q13873 1038 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 CCSAPQ6IQ19 270 aaPredicted RBP15.21■□□□□ 0.03
CHTOP-206ENST00000495554 RFX8Q6ZV50 586 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 TRIM74Q86UV6 250 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 TRIM73Q86UV7 250 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 TMEM86AQ8N2M4 240 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 PDCD7Q8N8D1 485 aaKnown RBP15.21■□□□□ 0.03
CHTOP-206ENST00000495554 SLC13A1Q9BZW2 595 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 TMPRSS4Q9NRS4 437 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 PIGVQ9NUD9 493 aa15.21■□□□□ 0.03
CHTOP-206ENST00000495554 TIMM13Q9Y5L4 95 aaPredicted RBP15.21■□□□□ 0.03
CHTOP-206ENST00000495554 EEF2KO00418 725 aaKnown RBP15.21■□□□□ 0.02
CHTOP-206ENST00000495554 TRAFD1O14545 582 aaPredicted RBP15.21■□□□□ 0.02
CHTOP-206ENST00000495554 CAPN9O14815 690 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 MGEA5O60502 916 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 ARFIP2P53365 341 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 RABGGTBP53611 331 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 DPYSQ14117 519 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 KCNA10Q16322 511 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 CASC4Q6P4E1 433 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 TIFABQ6ZNK6 161 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 MRPL10Q7Z7H8 261 aaKnown RBP15.21■□□□□ 0.02
CHTOP-206ENST00000495554 CCNYQ8ND76 341 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 KLHDC9Q8NEP7 349 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 TBC1D31Q96DN5 1066 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 SPC25Q9HBM1 224 aa15.21■□□□□ 0.02
CHTOP-206ENST00000495554 WDR27A2RRH5 827 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 HMX2A2RU54 273 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 DLDP09622 509 aaKnown RBP15.2■□□□□ 0.02
CHTOP-206ENST00000495554 CCND1P24385 295 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 CCND3P30281 292 aaPredicted RBP15.2■□□□□ 0.02
CHTOP-206ENST00000495554 CRHR1P34998 444 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 ADRA1BP35368 520 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 SCNN1GP51170 649 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 IRX1P78414 480 aaPredicted RBP15.2■□□□□ 0.02
CHTOP-206ENST00000495554 MROH9Q5TGP6 573 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 ZNF449Q6P9G9 518 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 HFE2Q6ZVN8 426 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 PDZD4Q76G19 769 aaPredicted RBP15.2■□□□□ 0.02
CHTOP-206ENST00000495554 UTP4Q969X6 686 aaKnown RBP15.2■□□□□ 0.02
CHTOP-206ENST00000495554 NTAN1Q96AB6 310 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 SLC7A6OSQ96CW6 309 aaPredicted RBP15.2■□□□□ 0.02
CHTOP-206ENST00000495554 NAT9Q9BTE0 207 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 PRDM12Q9H4Q4 367 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 CNGB3Q9NQW8 809 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 TMEM30AQ9NV96 361 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 PADI3Q9ULW8 664 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 MYBPHLA2RUH7 354 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 CBX6O95503 412 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 FYNP06241 537 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 CD52P31358 61 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 E2F5Q15329 346 aa15.2■□□□□ 0.02
CHTOP-206ENST00000495554 CTC1Q2NKJ3 1217 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms