RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 RPS13P62277 151 aaKnown RBP3.58□□□□□ -1.84
RBM28-207ENST00000488249 ZNF91Q05481 1191 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 KCTD2Q14681 263 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 AAK1Q2M2I8 961 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 ZACNQ401N2 412 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 SLC9C1Q4G0N8 1177 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 GLE1Q53GS7 698 aaKnown RBP3.58□□□□□ -1.84
RBM28-207ENST00000488249 EARS2Q5JPH6 523 aaKnown RBP3.58□□□□□ -1.84
RBM28-207ENST00000488249 C10orf62Q5T681 223 aaPredicted RBP3.58□□□□□ -1.84
RBM28-207ENST00000488249 CASC1Q6TDU7 716 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 DEF8Q6ZN54 512 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 RBM44Q6ZP01 1051 aaKnown RBP3.58□□□□□ -1.84
RBM28-207ENST00000488249 RFX6Q8HWS3 928 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 UEVLDQ8IX04 471 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 OR4N4Q8N0Y3 316 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 PAF1Q8N7H5 531 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 SMG7Q92540 1137 aaKnown RBP3.58□□□□□ -1.84
RBM28-207ENST00000488249 PIGKQ92643 395 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 RSC1A1Q92681 617 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 COQ8BQ96D53 544 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 EID2BQ96D98 161 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 TSPAN18Q96SJ8 248 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 RSPH9Q9H1X1 276 aaPredicted RBP3.58□□□□□ -1.84
RBM28-207ENST00000488249 VPS16Q9H269 839 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 NFU1Q9UMS0 254 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 LZTS1Q9Y250 596 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 SPATA31A5Q5VU36 1347 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 SPATA31A7Q8IWB4 1347 aa3.58□□□□□ -1.84
RBM28-207ENST00000488249 F5H423 210 aaPredicted RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 M0QYT0 321 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 SYT5O00445 386 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 ADAM10O14672 748 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 MOSPD3O75425 235 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 CTSAP10619 480 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 ST6GAL1P15907 406 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 HOXA7P31268 230 aaPredicted RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 SOX2P48431 317 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 ID2Q02363 134 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 ICA1Q05084 483 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 DMWDQ09019 674 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 GALNT1Q10472 559 aaPredicted RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 MTA1Q13330 715 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 STIM1Q13586 685 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 RAPGEF1Q13905 1077 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 TMEM95Q3KNT9 176 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 PAPD7Q5XG87 772 aaKnown RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 ANKRD40Q6AI12 368 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 WDR93Q6P2C0 686 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 MYLK4Q86YV6 388 aaPredicted RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 TTC30BQ8N4P2 665 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 SRFBP1Q8NEF9 429 aaKnown RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 BCAS4Q8TDM0 211 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 PIGOQ8TEQ8 1089 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 POF1BQ8WVV4 589 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 IGFBPL1Q8WX77 278 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 ZNF622Q969S3 477 aaKnown RBP eCLIP3.57□□□□□ -1.841e-12■■■□□ 18.3
RBM28-207ENST00000488249 TRMT61AQ96FX7 289 aaKnown RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 REXO5Q96IC2 774 aaKnown RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 GPR78Q96P69 363 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 TMEM79Q9BSE2 394 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 KATNAL1Q9BW62 490 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 TRIM2Q9C040 744 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 SPRTNQ9H040 489 aaPredicted RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 CHMP4BQ9H444 224 aaKnown RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 TMEM184CQ9NVA4 438 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 TRNAU1APQ9NX07 287 aaKnown RBP3.57□□□□□ -1.84
RBM28-207ENST00000488249 B3GNT3Q9Y2A9 372 aa3.57□□□□□ -1.84
RBM28-207ENST00000488249 KAT6BQ8WYB5 2073 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 EMSYQ7Z589 1322 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 SLC22A23A1A5C7 686 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 FAM90A18PA6NE21 464 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 FAM90A16PA6NEW6 464 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 C2CD4BA6NLJ0 364 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 FAM90A9PA6NNJ1 464 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 FAM90A5PA8MXJ8 464 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 KIF28PB7ZC32 967 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 TCERG1O14776 1098 aaKnown RBP3.56□□□□□ -1.84
RBM28-207ENST00000488249 PPEF2O14830 753 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 NPHP1O15259 732 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 TLR2O60603 784 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 KAT7O95251 611 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 SGPL1O95470 568 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 FGBP02675 491 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 ITGA2BP08514 1039 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 RFPL3SP0C7P2 107 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 FAM90A15PP0C7V4 464 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 FAM90A14PP0C7W9 464 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 LMO1P25800 156 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 SERPINF1P36955 418 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 CPA2P48052 419 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 TRAPPC10P48553 1259 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 SLC12A2P55011 1212 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 RPL15P61313 204 aaKnown RBP3.56□□□□□ -1.84
RBM28-207ENST00000488249 TLE3Q04726 772 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 CHAF1AQ13111 956 aaPredicted RBP3.56□□□□□ -1.84
RBM28-207ENST00000488249 SIM2Q14190 667 aaPredicted RBP3.56□□□□□ -1.84
RBM28-207ENST00000488249 RABEP1Q15276 862 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 BTBD16Q32M84 506 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 ANXA2RQ3ZCQ2 193 aa3.56□□□□□ -1.84
RBM28-207ENST00000488249 TRIM60Q495X7 471 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms