RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 USP6NLQ92738 828 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 WNT8BQ93098 351 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 RNF157Q96PX1 679 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 FAM96AQ9H5X1 160 aa11.6□□□□□ -0.55
SMPD4-218ENST00000482171 FCHO1O14526 889 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 LRCH4O75427 683 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 CD48P09326 243 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 HOXC6P09630 235 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 OR4Q2P0C623 313 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 TUBP50607 506 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 AQP5P55064 265 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 RIPK1Q13546 671 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 SLC44A4Q53GD3 710 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 ACBD5Q5T8D3 534 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-218ENST00000482171 SLC4A11Q8NBS3 891 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 STKLD1Q8NE28 680 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 ZNF75CPQ92670 426 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-218ENST00000482171 TMA16Q96EY4 203 aaKnown RBP11.59□□□□□ -0.55
SMPD4-218ENST00000482171 KCNK16Q96T55 309 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 LGMNQ99538 433 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 CCT7Q99832 543 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 EGFL8Q99944 293 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 IARS2Q9NSE4 1012 aaKnown RBP11.59□□□□□ -0.55
SMPD4-218ENST00000482171 DTNAQ9Y4J8 743 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 NAV1Q8NEY1 1877 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 GOLGA8QA0A0J9YX86 632 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 WDR27A2RRH5 827 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 DPPA5A6NC42 116 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 GOLGA8OA6NCC3 632 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 GOLGA8NF8WBI6 632 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 ATP6V1C1P21283 382 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 GSTT1P30711 240 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 NOS2P35228 1153 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 RNF220Q5VTB9 566 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 PCYT2Q99447 389 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 ZNF184Q99676 751 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-218ENST00000482171 FICDQ9BVA6 458 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 FRMD8P1Q9BZ68 369 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-218ENST00000482171 PCDHB5Q9Y5E4 795 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 ILDR2Q71H61 639 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 ZDHHC17Q8IUH5 632 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 YME1L1Q96TA2 773 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 CAAP1Q9H8G2 361 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 LSM7Q9UK45 103 aaKnown RBP11.59□□□□□ -0.55
SMPD4-218ENST00000482171 PADI3Q9ULW8 664 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 PTPRJQ12913 1337 aa11.59□□□□□ -0.55
SMPD4-218ENST00000482171 KIAA0100Q14667 2235 aaKnown RBP11.59□□□□□ -0.55
SMPD4-218ENST00000482171 AVILO75366 819 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 CLPTM1O96005 669 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 RPA3P35244 121 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-218ENST00000482171 NNMTP40261 264 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 COPAP53621 1224 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 NOGQ13253 232 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 BBS12Q6ZW61 710 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 SLC26A11Q86WA9 606 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 LRRC52Q8N7C0 313 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 MYLPFQ96A32 169 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 TWNKQ96RR1 684 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 RNF39Q9H2S5 420 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 PRDM12Q9H4Q4 367 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 CHST12Q9NRB3 414 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 OR12D3Q9UGF7 316 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 MOSPD1Q9UJG1 213 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 GRID1Q9ULK0 1009 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 SLC27A5Q9Y2P5 690 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 SH3BP1Q9Y3L3 701 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 C4AP0C0L4 1744 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 TIAM2Q8IVF5 1701 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 E7ENQ6 273 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 H0Y626 953 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 TSPAN3O60637 253 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 MBL2P11226 248 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-218ENST00000482171 ETS2P15036 469 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 LMO2P25791 158 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 CRHR2Q13324 411 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 ITGA7Q13683 1181 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 KCNA10Q16322 511 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 KBTBD12Q3ZCT8 623 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 LRRC38Q5VT99 294 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 INPP5DQ92835 1189 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 HSFY1Q96LI6 401 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 FRMD8Q9BZ67 464 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-218ENST00000482171 F5H5T6 163 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 PPEF2O14830 753 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 ANXA9O76027 345 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 KLHL2O95198 593 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 HSPA8P11142 646 aaKnown RBP11.58□□□□□ -0.56
SMPD4-218ENST00000482171 SLC2A3P11169 496 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 CSE1LP55060 971 aaKnown RBP11.58□□□□□ -0.56
SMPD4-218ENST00000482171 FOXD4Q12950 439 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-218ENST00000482171 UGP2Q16851 508 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 STRA8Q7Z7C7 330 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 XYLT1Q86Y38 959 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 DDIASQ8IXT1 998 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 CMTM5Q96DZ9 223 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 MPP4Q96JB8 637 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 FIZ1Q96SL8 496 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 NRDE2Q9H7Z3 1164 aa11.58□□□□□ -0.56
SMPD4-218ENST00000482171 ANKRD36CQ5JPF3 1778 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms