RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SH3RF2Q8TEC5 729 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 ATRIPQ8WXE1 791 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 SLC35A4Q96G79 324 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 BORCS6Q96GS4 357 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 CNOT6LQ96LI5 555 aaKnown RBP5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 Q96M66 194 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 TUBGCP2Q9BSJ2 902 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 MTG1Q9BT17 334 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 CD244Q9BZW8 370 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 VPS16Q9H269 839 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 CCDC68Q9H2F9 335 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 SEMA6CQ9H3T2 930 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 XPNPEP3Q9NQH7 507 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 PRDM5Q9NQX1 630 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 AGPAT3Q9NRZ7 376 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 MRGBPQ9NV56 204 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 TAB2Q9NYJ8 693 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 KIF17Q9P2E2 1029 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 CGNQ9P2M7 1197 aaKnown RBP5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 EXOC7Q9UPT5 735 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 NUB1Q9Y5A7 615 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 SIP14410 1827 aa5.51□□□□□ -1.53
HMGB1P4-201ENST00000455362 NRCAMQ92823 1304 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 A0A087X0M5 115 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 A0A1B0GX30 115 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 A0A1W2PPH5 198 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 UBA6A0AVT1 1052 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 MBLAC1A4D2B0 266 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 F5H0A9 414 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 KRIT1O00522 736 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 SLC16A3O15427 465 aaKnown RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 FGF10O15520 208 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 AKAP3O75969 853 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 PIGRP01833 764 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 TPM3P06753 285 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 GJB1P08034 283 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 SYPP08247 313 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 NFICP08651 508 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 GLB1P16278 677 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 TMOD1P28289 359 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 CST5P28325 142 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 ADSSP30520 456 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 SDHAP31040 664 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 HOXC8P31273 242 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 GJA4P35212 333 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 CTNNA1P35221 906 aaKnown RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 PSMC2P35998 433 aaKnown RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 PBX1P40424 430 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 WASP42768 502 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 CASP4P49662 377 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 PAPOLAP51003 745 aaKnown RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 CYP2J2P51589 502 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 CLCN3P51790 818 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 DRG2P55039 364 aaKnown RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 SUMO3P55854 103 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 PCBP3P57721 371 aaKnown RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 PTENP60484 403 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 DSC2Q02487 901 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 UBXN1Q04323 297 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 TLE2Q04725 743 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 TFDP1Q14186 410 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 SPARCL1Q14515 664 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 NR0B2Q15466 257 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 KCNA10Q16322 511 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 MEA1Q16626 185 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 CCDC40Q4G0X9 1142 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 HABP4Q5JVS0 413 aaKnown RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 MIIPQ5JXC2 388 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 RTP2Q5QGT7 225 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 NFRKBQ6P4R8 1299 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 SLC39A4Q6P5W5 647 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 CXCL17Q6UXB2 119 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 BEND5Q7L4P6 421 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 MOGAT3Q86VF5 341 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 RHPN2Q8IUC4 686 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 VSTM4Q8IW00 320 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 AGGF1Q8N302 714 aaeCLIP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 TOP6BLQ8N6T0 577 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 SPC24Q8NBT2 197 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 RNF149Q8NC42 400 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 PIP4K2CQ8TBX8 421 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 C18orf8Q96DM3 657 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 CBWD1Q9BRT8 395 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 KATNAL1Q9BW62 490 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 CDADC1Q9BWV3 514 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 PLVAPQ9BX97 442 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 NFKBIZQ9BYH8 718 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 FZD8Q9H461 694 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 AKTIPQ9H8T0 292 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 RC3H2Q9HBD1 1191 aaKnown RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 SERHLQ9NQF3 203 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 AP5S1Q9NUS5 200 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 NFKBIL1Q9UBC1 381 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 MYO1AQ9UBC5 1043 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 HDAC6Q9UBN7 1215 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 ARMCX3Q9UH62 379 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 TRIM17Q9Y577 477 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 STYXL1Q9Y6J8 313 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 NUMBLQ9Y6R0 609 aa5.5□□□□□ -1.53
HMGB1P4-201ENST00000455362 TRIP11Q15643 1979 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms