RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 RUSC1Q9BVN2 902 aa5.12□□□□□ -1.59
EPHA3-202ENST00000452448 ZNF341Q9BYN7 854 aa5.12□□□□□ -1.59
EPHA3-202ENST00000452448 TINAGL1Q9GZM7 467 aaPredicted RBP5.12□□□□□ -1.59
EPHA3-202ENST00000452448 EHD4Q9H223 541 aa5.12□□□□□ -1.59
EPHA3-202ENST00000452448 SUV39H2Q9H5I1 410 aa5.12□□□□□ -1.59
EPHA3-202ENST00000452448 MRPL47Q9HD33 250 aaKnown RBP5.12□□□□□ -1.59
EPHA3-202ENST00000452448 PLSCR4Q9NRQ2 329 aa5.12□□□□□ -1.59
EPHA3-202ENST00000452448 ZNF275Q9NSD4 429 aaPredicted RBP5.12□□□□□ -1.59
EPHA3-202ENST00000452448 LRRC4BQ9NT99 713 aa5.12□□□□□ -1.59
EPHA3-202ENST00000452448 FAM105AQ9NUU6 356 aa5.12□□□□□ -1.59
EPHA3-202ENST00000452448 RPS6KA6Q9UK32 745 aa5.12□□□□□ -1.59
EPHA3-202ENST00000452448 NAALAD2Q9Y3Q0 740 aa5.12□□□□□ -1.59
EPHA3-202ENST00000452448 ARHGEF28Q8N1W1 1705 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 NEXMIFQ5QGS0 1516 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PCDH11XQ9BZA7 1347 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PCDH11YQ9BZA8 1340 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 LRRC14BA6NHZ5 514 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 BACH1O14867 736 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 KCNN4O15554 427 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 AP5Z1O43299 807 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 FBXO24O75426 580 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ANXA6P08133 673 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 FGF4P08620 206 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 SNRNP70P08621 437 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 GJA1P17302 382 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ATP6V1C1P21283 382 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PON1P27169 355 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ALDH4A1P30038 563 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 WNT5AP41221 380 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 SLC15A1P46059 708 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 GIPRP48546 466 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 GRIN2CQ14957 1233 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 CCDC85BQ15834 202 aaPredicted RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 KCTD21Q4G0X4 260 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ZCWPW2Q504Y3 356 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 RPUSD3Q6P087 351 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ZCCHC12Q6PEW1 402 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ZSWIM9Q86XI8 627 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 CAMK1DQ8IU85 385 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 TTLL6Q8N841 843 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 IGSF22Q8N9C0 903 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 CLHC1Q8NHS4 586 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 CENPIQ92674 756 aaPredicted RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 CCDC74AQ96AQ1 378 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PHF21AQ96BD5 680 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 HSPBAP1Q96EW2 488 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 TOE1Q96GM8 510 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 NOC4LQ9BVI4 516 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ADAM19Q9H013 955 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 SIAEQ9HAT2 523 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PTTG2Q9NZH5 202 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ZSWIM5Q9P217 1185 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 UXTQ9UBK9 157 aaPredicted RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ERVK-11Q9UQG0 969 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 VWA7Q9Y334 891 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ZNF175Q9Y473 711 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 NR2E3Q9Y5X4 410 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 FPGT-TNNI3KV9GXZ4 949 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 A0A1W2PP64 1363 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 STRCP1A6NGW2 1772 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 FLT1P17948 1338 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PHLPP2Q6ZVD8 1323 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ANKRD26Q9UPS8 1709 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 LOC390937A0A1W2PQ73 354 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 H0YIV9 168 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 NEMP1O14524 444 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PPEF2O14830 753 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 DCLK1O15075 740 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 SLC25A17O43808 307 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 TSPAN3O60637 253 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 CPNE3O75131 537 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 HEXIM1O94992 359 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PFKMP08237 780 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 UBTFL6P0CB48 400 aaPredicted RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 DBTP11182 482 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ATP2A2P16615 1042 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 RHCEP18577 417 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PSMA2P25787 234 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 CASP14P31944 242 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 GPR3P46089 330 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 STARP49675 285 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ATXN1P54253 815 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ATP12AP54707 1039 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 NPEPPSP55786 919 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 GNG2P59768 71 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 EIF3EP60228 445 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 C1QTNF8P60827 252 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ACTR1AP61163 376 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ERVK-21P61565 698 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 NAA20P61599 178 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 RHDQ02161 417 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 COASYQ13057 564 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PPIL2Q13356 520 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 TRIM25Q14258 630 aaKnown RBP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PTPAQ15257 358 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 LLGL1Q15334 1064 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 PCBP2Q15366 365 aaKnown RBP eCLIP5.11□□□□□ -1.59
EPHA3-202ENST00000452448 TXNRD1Q16881 649 aa5.11□□□□□ -1.59
EPHA3-202ENST00000452448 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms