RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 WBP2Q969T9 261 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 HVCN1Q96D96 273 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 RRP36Q96EU6 259 aaKnown RBP4.03□□□□□ -1.76
CNGA1-203ENST00000420489 INPP4AQ96PE3 977 aaPredicted RBP4.03□□□□□ -1.76
CNGA1-203ENST00000420489 NUP88Q99567 741 aaPredicted RBP4.03□□□□□ -1.76
CNGA1-203ENST00000420489 ELF4Q99607 663 aaPredicted RBP4.03□□□□□ -1.76
CNGA1-203ENST00000420489 SPON2Q9BUD6 331 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 PLA2G12AQ9BZM1 189 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 BRINP2Q9C0B6 783 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 ENKD1Q9H0I2 346 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 IL21RQ9HBE5 538 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 CD248Q9HCU0 757 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 ITM2CQ9NQX7 267 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 SIRT5Q9NXA8 310 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 MCM9Q9NXL9 1143 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 DDX56Q9NY93 547 aaKnown RBP4.03□□□□□ -1.76
CNGA1-203ENST00000420489 MTMR4Q9NYA4 1195 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 CNOT6Q9ULM6 557 aaKnown RBP4.03□□□□□ -1.76
CNGA1-203ENST00000420489 TAF6LQ9Y6J9 622 aa4.03□□□□□ -1.76
CNGA1-203ENST00000420489 DDX49Q9Y6V7 483 aaKnown RBP4.03□□□□□ -1.76
CNGA1-203ENST00000420489 EFCAB7A8K855 629 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 WASH4PA8MWX3 477 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 STSP08842 583 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 THEGLP0DJG4 465 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 MYBP10242 640 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 VDRP11473 427 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 XRCC6P12956 609 aaKnown RBP eCLIP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 CD53P19397 219 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 IFNAR2P48551 515 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 ZNF235Q14590 738 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 NR1I3Q14994 352 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 PSMD5Q16401 504 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 SYDE2Q5VT97 1194 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 TCERG1LQ5VWI1 586 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 CYP2R1Q6VVX0 501 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 RBM44Q6ZP01 1051 aaKnown RBP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 ANKS3Q6ZW76 656 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 SEC14L1Q92503 715 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 NDRG1Q92597 394 aaKnown RBP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 RNF34Q969K3 372 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 GJA10Q969M2 543 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 CHFRQ96EP1 664 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 SLC39A13Q96H72 371 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 TBATAQ96M53 351 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 ZNF512Q96ME7 567 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 GABRG3Q99928 467 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 TPSD1Q9BZJ3 242 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 FOXP3Q9BZS1 431 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 LRRC27Q9C0I9 530 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 ZSWIM4Q9H7M6 989 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 TMEM206Q9H813 350 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 TMEM51Q9NW97 253 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 SUCOQ9UBS9 1254 aaKnown RBP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 TCEAL9Q9UHQ7 104 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 SF3B6Q9Y3B4 125 aaKnown RBP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 ZNF451Q9Y4E5 1061 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 IPPQ9Y573 584 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 ARID1BQ8NFD5 2236 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 H7C4K7 107 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 K7EQS6 105 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 PRC1O43663 620 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 DPM1O60762 260 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 IGHDP01880 384 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 S100BP04271 92 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 FAM163BP0C2L3 166 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 CCKBRP32239 447 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 ARHGEF16Q5VV41 709 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 HLA-DQA1Q5Y7H0 255 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 PRSS57Q6UWY2 283 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 HTR3CQ8WXA8 447 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 NAF1Q96HR8 494 aaKnown RBP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 SIGLEC10Q96LC7 697 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 SYT3Q9BQG1 590 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 PRDM14Q9GZV8 571 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 MKRN2Q9H000 416 aaKnown RBP4.02□□□□□ -1.77
CNGA1-203ENST00000420489 GJB4Q9NTQ9 266 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 TRPM5Q9NZQ8 1165 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 CLIP2Q9UDT6 1046 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 ADAM28Q9UKQ2 775 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 PCDHGA3Q9Y5H0 932 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 CYP46A1Q9Y6A2 500 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 FPGT-TNNI3KV9GXZ4 949 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 SCN8AQ9UQD0 1980 aa4.02□□□□□ -1.77
CNGA1-203ENST00000420489 ICE1Q9Y2F5 2266 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 KALRNO60229 2985 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 TPM2P07951 284 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 PARP1P09874 1014 aaKnown RBP4.01□□□□□ -1.77
CNGA1-203ENST00000420489 PEPDP12955 493 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 VAV1P15498 845 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 GJA1P17302 382 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 CD27P26842 260 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 CALML3P27482 149 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 CDC25CP30307 473 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 TRHRP34981 398 aaPredicted RBP4.01□□□□□ -1.77
CNGA1-203ENST00000420489 RABIFP47224 123 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 PMS1P54277 932 aaKnown RBP4.01□□□□□ -1.77
CNGA1-203ENST00000420489 CLCQ05315 142 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 TFCP2Q12800 502 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 FILIP1Q7Z7B0 1213 aa4.01□□□□□ -1.77
CNGA1-203ENST00000420489 XYLT1Q86Y38 959 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms