RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 MMP13P45452 471 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 MGAT5Q09328 741 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC39A4Q6P5W5 647 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 BBS12Q6ZW61 710 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 TM6SF2Q9BZW4 377 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 BRD8Q9H0E9 1235 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC28A3Q9HAS3 691 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 VPS9D1Q9Y2B5 631 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 UBR2Q8IWV8 1755 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 H0Y3Z8 333 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 KPNA3O00505 521 aaPredicted RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 TRIM16O95361 564 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 PTPN7P35236 360 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 SNCBQ16143 134 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 INTS6LQ5JSJ4 861 aaKnown RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 PLEKHA7Q6IQ23 1121 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 RNF217Q8TC41 542 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 APBB2Q92870 758 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 KCNK16Q96T55 309 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 LPIN3Q9BQK8 851 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 EFHD1Q9BUP0 239 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 EPN3Q9H201 632 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 AJAP1Q9UKB5 411 aaPredicted RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 TRAV19A0A0A6YYK7 116 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 PARNO95453 639 aaKnown RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 GLUD1P00367 558 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 STMN1P16949 149 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 PSMB4P28070 264 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 JAM2P57087 298 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 KDSRQ06136 332 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ZNF284Q2VY69 593 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 SGO1Q5FBB7 561 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 CES5AQ6NT32 575 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 RFX8Q6ZV50 586 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 XYLT1Q86Y38 959 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ZNF296Q8WUU4 475 aaPredicted RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 CLPBQ9H078 707 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ADA2Q9NZK5 511 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 SEPT3Q9UH03 358 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 DRG1Q9Y295 367 aaKnown RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 TLL2Q9Y6L7 1015 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 hCG_1818297A0A087WSY0 165 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 HACD1B0YJ81 288 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 EFCAB14O75071 495 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 GLP2RO95838 553 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 CYP3A5P20815 502 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 GJA5P36382 358 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 IRAK1P51617 712 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 TAF5Q15542 800 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 TIGD5Q53EQ6 642 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ANKRD20A2Q5SQ80 823 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 VARS2Q5ST30 1063 aaKnown RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ANKRD20A1Q5TYW2 823 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 VSTM1Q6UX27 236 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 TMC3Q7Z5M5 1100 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 POLNQ7Z5Q5 900 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ARID3BQ8IVW6 561 aaPredicted RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 UBE2OQ9C0C9 1292 aaKnown RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 CDHR5Q9HBB8 845 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ADGRA2Q96PE1 1338 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 A0A1W2PQH9 124 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 LIASO43766 372 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 CCDC22O60826 627 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 PIGRP01833 764 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 CCL5P13501 91 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ERFP50548 548 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ZNF135P52742 658 aaPredicted RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC5A3P53794 718 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 OVGP1Q12889 678 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 MTA1Q13330 715 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC25A52Q3SY17 297 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 APTXQ7Z2E3 356 aaKnown RBP13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ECHDC2Q86YB7 292 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 RAB42Q8N4Z0 105 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 PLK2Q9NYY3 685 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 ARL2BPQ9Y2Y0 163 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 L3MBTL1Q9Y468 752 aa13.43□□□□□ -0.26
PTPRN2-202ENST00000389416 TBC1D3BA6NDS4 549 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 EIF3HO15372 352 aaKnown RBP eCLIP13.42□□□□□ -0.265e-6■■□□□ 14.2
PTPRN2-202ENST00000389416 RIPK2O43353 540 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 BUD23O43709 281 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 VPS26AO75436 327 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 SUPT7LO94864 414 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 ZWINTO95229 277 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 ATG7O95352 703 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 MAP2K2P36507 400 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 PLA2G4AP47712 749 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 CRADDP78560 199 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 EFTUD2Q15029 972 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■■■□□ 16.9
PTPRN2-202ENST00000389416 TTLL9Q3SXZ7 439 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 MAB21L3Q8N8X9 362 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 NCLNQ969V3 563 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 C2orf49Q9BVC5 232 aaPredicted RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 ZYG11BQ9C0D3 744 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 UPF3AQ9H1J1 476 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 UTP6Q9NYH9 597 aaKnown RBP13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 PKD2L2Q9NZM6 624 aa13.42□□□□□ -0.26
PTPRN2-202ENST00000389416 RBAK-RBAKDNI3L0D1 243 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms