RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ADAM2Q99965 735 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SYT11Q9BT88 431 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 THAP1Q9NVV9 213 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 FAM8A1Q9UBU6 413 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 AAR2Q9Y312 384 aaKnown RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 STYXL1Q9Y6J8 313 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 KIF3CO14782 793 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 LYPLA1O75608 230 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 AKR1A1P14550 325 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 NFKB1P19838 968 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 KLRC2P26717 231 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 IL1RL1Q01638 556 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ARHGAP1Q07960 439 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 KPNB1Q14974 876 aaKnown RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 PARP6Q2NL67 630 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ANKRD20A4Q4UJ75 823 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 DDX60LQ5H9U9 1706 aaKnown RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 CMC1Q7Z7K0 106 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ALYREFQ86V81 257 aaKnown RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 IFNEQ86WN2 208 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ST13P4Q8IZP2 240 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 TNS4Q8IZW8 715 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 KCTD15Q96SI1 283 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 TRPC7Q9HCX4 862 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ANLNQ9NQW6 1124 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 LGALS13Q9UHV8 139 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ST3GAL5Q9UNP4 418 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ACOT9Q9Y305 439 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 HACD1B0YJ81 288 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 MFSD11O43934 449 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SUPT7LO94864 414 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ENDOD1O94919 500 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ATG7O95352 703 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SERPINE1P05121 402 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 BRCC3P46736 316 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 MRPS5P82675 430 aaKnown RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 CDH17Q12864 832 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SDHAF4Q5VUM1 108 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 PDPK2PQ6A1A2 396 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ICA1LQ8NDH6 482 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SLC44A1Q8WWI5 657 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SLCO2A1Q92959 643 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ZNF317Q96PQ6 595 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 KCNK16Q96T55 309 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 MTG1Q9BT17 334 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 BEGAINQ9BUH8 593 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 ACSS2Q9NR19 701 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SYBUQ9NX95 663 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SUN2Q9UH99 717 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SCN7AQ01118 1682 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SLC12A8A0AV02 714 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 DCXO43602 365 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 PDE5AO76074 875 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 CCR1P32246 355 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 ENPEPQ07075 957 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 TARBP2Q15633 366 aaKnown RBP8.66□□□□□ -1.02
PTPRK-206ENST00000368215 CTXN3Q4LDR2 81 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 MSS51Q4VC12 460 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 PIGWQ7Z7B1 504 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 TTC30AQ86WT1 665 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 GALNT4Q8N4A0 578 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 RNF148Q8N7C7 305 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 TDRD5Q8NAT2 981 aaKnown RBP8.66□□□□□ -1.02
PTPRK-206ENST00000368215 PDZD8Q8NEN9 1154 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 SEC14L1Q92503 715 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 DMAP1Q9NPF5 467 aaPredicted RBP8.66□□□□□ -1.02
PTPRK-206ENST00000368215 NSMCE4AQ9NXX6 385 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 PACSIN3Q9UKS6 424 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 C15orf41Q9Y2V0 281 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 ARAP2Q8WZ64 1704 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 GRK2P25098 689 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 PLK1P53350 603 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 MAP2K5Q13163 448 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 XRCC4Q13426 336 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 DEFB107AQ8IZN7 70 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 PHF21BQ96EK2 531 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 MCRS1Q96EZ8 462 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 NAF1Q96HR8 494 aaKnown RBP8.66□□□□□ -1.02
PTPRK-206ENST00000368215 AAASQ9NRG9 546 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 NDFIP2Q9NV92 336 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 HACD3Q9P035 362 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 AFF4Q9UHB7 1163 aaKnown RBP8.66□□□□□ -1.02
PTPRK-206ENST00000368215 PCDHA11Q9Y5I1 949 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 TRPV2Q9Y5S1 764 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 ABCA3Q99758 1704 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 ENO4A6NNW6 628 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 NCAM2O15394 837 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 NDUFS3O75489 264 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 ZMPSTE24O75844 475 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 HSPA8P11142 646 aaKnown RBP8.66□□□□□ -1.02
PTPRK-206ENST00000368215 FCGRTP55899 365 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 NME5P56597 212 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 TWF1Q12792 350 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 SIX1Q15475 284 aaPredicted RBP8.66□□□□□ -1.02
PTPRK-206ENST00000368215 FAM83EQ2M2I3 478 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 SLC39A12Q504Y0 691 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 ZNF470Q6ECI4 717 aa8.66□□□□□ -1.02
PTPRK-206ENST00000368215 TRMT10BQ6PF06 316 aaKnown RBP8.66□□□□□ -1.02
PTPRK-206ENST00000368215 DRICH1Q6PGQ1 229 aaPredicted RBP8.66□□□□□ -1.02
PTPRK-206ENST00000368215 ADGRD1Q6QNK2 874 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms