RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 NOMO1Q15155 1222 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 TRADDQ15628 312 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 SNX30Q5VWJ9 437 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 PYROXD2Q8N2H3 581 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 ALLCQ8N6M5 410 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 MRPL43Q8N983 215 aaKnown RBP12.47□□□□□ -0.41
USF1-203ENST00000368021 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 PDZD8Q8NEN9 1154 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 CASP10Q92851 521 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 MYRFLQ96LU7 910 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 HAPLN3Q96S86 360 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 CDK5RAP1Q96SZ6 601 aaKnown RBP12.47□□□□□ -0.41
USF1-203ENST00000368021 FAM118BQ9BPY3 351 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 CYP4F11Q9HBI6 524 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 CLDND1Q9NY35 253 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 NFU1Q9UMS0 254 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 ZNF148Q9UQR1 794 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 TLR6Q9Y2C9 796 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 C2orf71A6NGG8 1288 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 I6L893 689 aaPredicted RBP12.46□□□□□ -0.41
USF1-203ENST00000368021 LINC01565O15544 149 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 SLC2A3P11169 496 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 PECAM1P16284 738 aaPredicted RBP12.46□□□□□ -0.41
USF1-203ENST00000368021 GOT1P17174 413 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 ELF1P32519 619 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 GIPC2Q8TF65 315 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 CAVIN3Q969G5 261 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 HAUS1Q96CS2 278 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 TRMT2BQ96GJ1 504 aaKnown RBP12.46□□□□□ -0.41
USF1-203ENST00000368021 MAGEB5Q9BZ81 275 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 OSBPL2Q9H1P3 480 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 ANLNQ9NQW6 1124 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 SAE1Q9UBE0 346 aaPredicted RBP12.46□□□□□ -0.41
USF1-203ENST00000368021 YIPF1Q9Y548 306 aa12.46□□□□□ -0.41
USF1-203ENST00000368021 EEF2KO00418 725 aaKnown RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 MAP2K7O14733 419 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 SEC31AO94979 1220 aaKnown RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 CNPP09543 421 aaKnown RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 RARGP13631 454 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 HMGA1P17096 107 aaKnown RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 KCNA5P22460 613 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 KLRC2P26717 231 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 STIP1P31948 543 aaKnown RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 HTR7P34969 479 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 RPL21P46778 160 aaKnown RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 EIF3EP60228 445 aaKnown RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 DPYSQ14117 519 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.42
USF1-203ENST00000368021 VEPH1Q14D04 833 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 PDCD2Q16342 344 aaPredicted RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 AP1ARQ63HQ0 302 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 RFX8Q6ZV50 586 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 BZW1Q7L1Q6 419 aaKnown RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 GSTA5Q7RTV2 222 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 DDX42Q86XP3 938 aaKnown RBP eCLIP12.46□□□□□ -0.42
USF1-203ENST00000368021 GSPT2Q8IYD1 628 aaKnown RBP12.46□□□□□ -0.42
USF1-203ENST00000368021 RNF34Q969K3 372 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 PPP2R3CQ969Q6 453 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 MIEF2Q96C03 454 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 SLC39A13Q96H72 371 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 EPAS1Q99814 870 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 DPH5Q9H2P9 285 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 TMPRSS4Q9NRS4 437 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 WHRNQ9P202 907 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 OR12D3Q9UGF7 316 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 SFMBT1Q9UHJ3 866 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 SH3BP1Q9Y3L3 701 aa12.46□□□□□ -0.42
USF1-203ENST00000368021 KCNU1A8MYU2 1149 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 H3BQ06 376 aaPredicted RBP12.45□□□□□ -0.42
USF1-203ENST00000368021 PRRG1O14668 218 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 CHUKO15111 745 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 CREB3O43889 395 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 ADH1AP07327 375 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 RBP3P10745 1247 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 IVDP26440 423 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 PPP3CCP48454 512 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 DLX2Q07687 328 aaPredicted RBP12.45□□□□□ -0.42
USF1-203ENST00000368021 MTA1Q13330 715 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 PLD1Q13393 1074 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 XRCC4Q13426 336 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 NCBP2-AS2Q69YL0 99 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 KLHDC10Q6PID8 442 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 HLA-CQ95604 372 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 TMEM121Q9BTD3 319 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 FUT8Q9BYC5 575 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 TRIM31Q9BZY9 425 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 PCDH9Q9HC56 1237 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 ZDHHC18Q9NUE0 388 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 GRHL1Q9NZI5 618 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 ASIC3Q9UHC3 531 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 MAGED2Q9UNF1 606 aaPredicted RBP12.45□□□□□ -0.42
USF1-203ENST00000368021 SNX24Q9Y343 169 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 INSL5Q9Y5Q6 135 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 ATG2AQ2TAZ0 1938 aa12.45□□□□□ -0.42
USF1-203ENST00000368021 CFAP69A5D8W1 941 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 DCLK1O15075 740 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 MSI1O43347 362 aaKnown RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 TLR5O60602 858 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 KRT14P02533 472 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms