RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 TBC1D3KA0A087X1G2 549 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 SLC12A8A0AV02 714 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TBC1D3FA6NER0 549 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TBC1D3LB9A6J9 549 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 C9orf172C9J069 976 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 CASC3O15234 703 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 RNASEH1O60930 286 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TBC1D3HP0C7X1 549 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 BDNFP23560 247 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 GUCY2CP25092 1073 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 CLCN1P35523 988 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 NUDT1P36639 197 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 RPIAP49247 311 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 PEX3P56589 373 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 RNASE9P60153 205 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 GOLGA8FQ08AF8 430 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 GOLGA8DPQ0D2H9 430 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 STRN3Q13033 797 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 INPP5JQ15735 1006 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 CCDC142Q17RM4 750 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 C14orf28Q4W4Y0 310 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TBC1D3GQ6DHY5 549 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TBC1D3CQ6IPX1 549 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TAS1R3Q7RTX0 852 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 XYLT1Q86Y38 959 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TBC1D3Q8IZP1 549 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 BLIDQ8IZY5 108 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 PDCL2Q8N4E4 241 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 GLMNQ92990 594 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TMEM159Q96B96 161 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TMEM74Q96NL1 305 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 GFM1Q96RP9 751 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 NAP1L4Q99733 375 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 INTS2Q9H0H0 1204 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 CDH19Q9H159 772 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 CCSER2Q9H7U1 834 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 SH3GLB2Q9NR46 395 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 GGT7Q9UJ14 662 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 SALL4Q9UJQ4 1053 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 FZD4Q9ULV1 537 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 DMTF1Q9Y222 760 aa9.41□□□□□ -0.9
UBE2D3-205ENST00000350435 KLF18A0A0U1RQI7 1052 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 AGRPO00253 132 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 NTN3O00634 580 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 LATO43561 262 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 HUS1O60921 280 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 ITGA3P26006 1051 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 PCSK1P29120 753 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 CCKBRP32239 447 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 NOS2P35228 1153 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 ETV5P41161 510 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 NPTX2P47972 431 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 PER3P56645 1201 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 HNRNPKP61978 463 aaKnown RBP eCLIP9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 MCL1Q07820 350 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 TMEM132DQ14C87 1099 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 ECM1Q16610 540 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 KYAT1Q16773 422 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 NEK8Q86SG6 692 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 CD302Q8IX05 232 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 TMEM86AQ8N2M4 240 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 KCTD17Q8N5Z5 321 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 RBBP8NLQ8NC74 664 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 OR14C36Q8NHC7 312 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 RUFY2Q8WXA3 655 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 OVCA2Q8WZ82 227 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 FBXO32Q969P5 355 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 PIWIL1Q96J94 861 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 SLC45A3Q96JT2 553 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 HAPLN3Q96S86 360 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 RSPH9Q9H1X1 276 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 KMT5AQ9NQR1 393 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 RRN3Q9NYV6 651 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 SUN2Q9UH99 717 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 KCND3Q9UK17 655 aa9.4□□□□□ -0.9
UBE2D3-205ENST00000350435 ZNF469Q96JG9 3925 aaPredicted RBP9.4□□□□□ -0.91
UBE2D3-205ENST00000350435 CSPG4Q6UVK1 2322 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 MYH11P35749 1972 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 C10orf142B7Z368 130 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 D6RAR5 112 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 PRAMEF26H0Y7S4 382 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 MID1O15344 667 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 DUX1O43812 170 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 CAPN3P20807 821 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 ITGB7P26010 798 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 VARSP26640 1264 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 YWHAQP27348 245 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 OAS2P29728 719 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 MAT2AP31153 395 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 TUBP50607 506 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 ADPRHP54922 357 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 PPP2CBP62714 309 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 PPP2CAP67775 309 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 CYP27A1Q02318 531 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 POM121L1PQ3SYA9 428 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 TMEM215Q68D42 235 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 SND1Q7KZF4 910 aaKnown RBP eCLIP9.39□□□□□ -0.913e-6■□□□□ 8.1
UBE2D3-205ENST00000350435 OR6B3Q8NGW1 331 aa9.39□□□□□ -0.91
UBE2D3-205ENST00000350435 MYLPFQ96A32 169 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms