RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SPAG17Q6Q759 2223 aa28.62■■■□□ 2.17
ATPAF1-201ENST00000329231 FRYLO94915 3013 aa28.61■■■□□ 2.17
ATPAF1-201ENST00000329231 TACR2P21452 398 aa28.61■■■□□ 2.17
ATPAF1-201ENST00000329231 RNASE9P60153 205 aaKnown RBP28.61■■■□□ 2.17
ATPAF1-201ENST00000329231 FAM102AQ5T9C2 384 aaPredicted RBP28.61■■■□□ 2.17
ATPAF1-201ENST00000329231 RAP1GAP2Q684P5 730 aa28.61■■■□□ 2.17
ATPAF1-201ENST00000329231 LGI2Q8N0V4 545 aa28.61■■■□□ 2.17
ATPAF1-201ENST00000329231 FIBINQ8TAL6 211 aa28.61■■■□□ 2.17
ATPAF1-201ENST00000329231 SORCS1Q8WY21 1168 aa28.61■■■□□ 2.17
ATPAF1-201ENST00000329231 PLA2G4CQ9UP65 541 aa28.61■■■□□ 2.17
ATPAF1-201ENST00000329231 M0QYT0 321 aa28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 FOXD2O60548 495 aaPredicted RBP28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 NME3Q13232 169 aa28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 MAP7D1Q3KQU3 841 aa28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 PMS2CLQ68D20 193 aa28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 TRIM72Q6ZMU5 477 aa28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 ADIPOR2Q86V24 386 aa28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 WFDC5Q8TCV5 224 aa28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 TMEM51Q9NW97 253 aa28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 CALCOCO1Q9P1Z2 691 aa28.6■■■□□ 2.17
ATPAF1-201ENST00000329231 WDR87Q6ZQQ6 2873 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 PRR5-ARHGAP8B1AHC4 643 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 F5H5T6 163 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 MAP3K13O43283 966 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 SYNCRIPO60506 623 aaKnown RBP28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 ZNF217O75362 1048 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 CYP1A1P04798 512 aaPredicted RBP28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 ATP5BP06576 529 aaKnown RBP28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 NDUFV2P19404 249 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 BCKDHBP21953 392 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 CD70P32970 193 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 ARHGAP8P85298 464 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 FMO1Q01740 532 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 CDH18Q13634 790 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 FILIP1LQ4L180 1135 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 MBLAC2Q68D91 279 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 SERPINA13PQ6UXR4 307 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 CARNMT1Q8N4J0 409 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 ERLEC1Q96DZ1 483 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 MYEOVQ96EZ4 313 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 NPY6RQ99463 290 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 RTN4Q9NQC3 1192 aaKnown RBP28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 SDK1Q7Z5N4 2213 aa28.59■■■□□ 2.17
ATPAF1-201ENST00000329231 FAM170AA1A519 330 aa28.58■■■□□ 2.17
ATPAF1-201ENST00000329231 CHRNB2P17787 502 aa28.58■■■□□ 2.17
ATPAF1-201ENST00000329231 POLR2EP19388 210 aaKnown RBP28.58■■■□□ 2.17
ATPAF1-201ENST00000329231 ID4P47928 161 aa28.58■■■□□ 2.17
ATPAF1-201ENST00000329231 ZSCAN23Q3MJ62 389 aa28.58■■■□□ 2.17
ATPAF1-201ENST00000329231 CFAP52Q8N1V2 620 aa28.58■■■□□ 2.17
ATPAF1-201ENST00000329231 MRGPRX1Q96LB2 322 aa28.58■■■□□ 2.17
ATPAF1-201ENST00000329231 PRMT1Q99873 361 aaKnown RBP28.58■■■□□ 2.17
ATPAF1-201ENST00000329231 GOLGA8SH3BPF8 625 aa28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 LUC7L3O95232 432 aaKnown RBP28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 MPLP40238 635 aa28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 SULT1E1P49888 294 aa28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 FUT11Q495W5 492 aa28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 FNDC3BQ53EP0 1204 aaKnown RBP28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 C2CD6Q53TS8 623 aa28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 PRR23CQ6ZRP0 262 aa28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 SND1Q7KZF4 910 aaKnown RBP eCLIP28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 LPCAT2Q7L5N7 544 aa28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 CYB5D2Q8WUJ1 264 aa28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 NT5C3BQ969T7 300 aa28.57■■■□□ 2.16
ATPAF1-201ENST00000329231 H0Y626 953 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 TEX33O43247 280 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 F9P00740 461 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 EPHX1P07099 455 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 DLDP09622 509 aaKnown RBP28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 CCDC172P0C7W6 258 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 ZNF806P0C7X5 589 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 MMP8P22894 467 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 PRKCHP24723 683 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 CREB5Q02930 508 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 LMAN2Q12907 356 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 IQCB1Q15051 598 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 SLC25A52Q3SY17 297 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 RABGAP1LQ5R372 815 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 TTC39BQ5VTQ0 682 aaPredicted RBP28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 SLC36A4Q6YBV0 504 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 ARCQ7LC44 396 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 PGAP3Q96FM1 320 aaPredicted RBP28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 LMLNQ96KR4 655 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 MBD1Q9UIS9 605 aaPredicted RBP28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 PAXBP1Q9Y5B6 917 aa28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.56■■■□□ 2.16
ATPAF1-201ENST00000329231 SDHBP21912 280 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 NFKBIBQ15653 356 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 SPDYCQ5MJ68 293 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 BRMS1LQ5PSV4 323 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 PLA2G2CQ5R387 149 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 OTUD1Q5VV17 481 aaPredicted RBP28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 MMS22LQ6ZRQ5 1243 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 FRMD1Q8N878 549 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 RMDN1Q96DB5 314 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 WDCPQ9H6R7 721 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 PRDM16Q9HAZ2 1276 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 VPS45Q9NRW7 570 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 PIGVQ9NUD9 493 aa28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 KIAA1522Q9P206 1035 aaPredicted RBP28.55■■■□□ 2.16
ATPAF1-201ENST00000329231 TMEM59LQ9UK28 342 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms