RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 MCRS1Q96EZ8 462 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 DEPDC7Q96QD5 511 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 CYP3A43Q9HB55 503 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 A0A087WZ62 844 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 KLRC4O43908 158 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 TOMM70O94826 608 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 GLP2RO95838 553 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 JAK1P23458 1154 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 MIPP30301 263 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 ALDH1A3P47895 512 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 NDST1P52848 882 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 PPP3CAQ08209 521 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 NR1D2Q14995 579 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 FAM120BQ96EK7 910 aaKnown RBP16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 NSMCE2Q96MF7 247 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 ZDHHC15Q96MV8 337 aa16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 FDXACB1Q9BRP7 624 aaPredicted RBP16.83■□□□□ 0.28
SH3RF1-201ENST00000284637 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 SMIM22K7EJ46 135 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 TRIM24O15164 1050 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 EPB42P16452 691 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 PRKCIP41743 596 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 CD151P48509 253 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 CCT8P50990 548 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 PLK1P53350 603 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 HPCAP84074 193 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 SLC25A3Q00325 362 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 ZNF177Q13360 481 aaPredicted RBP16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 DPYSL3Q14195 570 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 EPS8L1Q8TE68 723 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 KCNK4Q9NYG8 393 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 MATN2O00339 956 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 ZNF862O60290 1169 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 ODC1P11926 461 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 RBL1P28749 1068 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 ABCG1P45844 678 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 TKTL1P51854 596 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 NRF1Q16656 503 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 GRTP1Q5TC63 336 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 ILDR2Q71H61 639 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 SCUBE3Q8IX30 993 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 PWWP2AQ96N64 755 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 SYTL2Q9HCH5 934 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 TSPAN3O60637 253 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 USP12O75317 370 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 COL9A3Q14050 684 aaPredicted RBP16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 FAM117BQ6P1L5 589 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 LRRC55Q6ZSA7 311 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 B3GALNT2Q8NCR0 500 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 FNIP1Q8TF40 1166 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 EDEM1Q92611 657 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 BORCS5Q969J3 196 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 ACOX2Q99424 681 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 PACSIN3Q9UKS6 424 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 SH3BP1Q9Y3L3 701 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 A8MUI8 341 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 VAPBO95292 243 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 LYNP07948 512 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 DRG2P55039 364 aaKnown RBP16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 EN1Q05925 392 aaPredicted RBP16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 LAMTOR4Q0VGL1 99 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 BST2Q10589 180 aaKnown RBP16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 USP4Q13107 963 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 ANGPT1Q15389 498 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 TAF1CQ15572 869 aaPredicted RBP16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 GNASQ5JWF2 1037 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 STK32CQ86UX6 486 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 RNF145Q96MT1 663 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 SORCS3Q9UPU3 1222 aa16.82■□□□□ 0.28
SH3RF1-201ENST00000284637 PGAM1P18669 254 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 SHMT1P34896 483 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 CDH18Q13634 790 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 AAGABQ6PD74 315 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 KCNT2Q6UVM3 1135 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 PRELID2Q8N945 189 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 LRRC39Q96DD0 335 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 ZBTB45Q96K62 511 aaPredicted RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 STK39Q9UEW8 545 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 NDUFAF1Q9Y375 327 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 SPATA31A1Q5TZJ5 1347 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 MAPTP10636 758 aaKnown RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 MLNP12872 115 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 FGFR3P22607 806 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 GSSP48637 474 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 RAB27AP51159 221 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 ALDH6A1Q02252 535 aaKnown RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 CDH17Q12864 832 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 SNAPC2Q13487 334 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 SLC22A9Q8IVM8 553 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 MYO1HQ8N1T3 1032 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 LNX1Q8TBB1 728 aaPredicted RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 APBA2Q99767 749 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 ATXN3LQ9H3M9 355 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 KRT87PA6NCN2 255 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 PTGES3LE9PB15 166 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 IL12RB1P42701 662 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 ARPC4P59998 168 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 HIST2H2ACQ16777 129 aaPredicted RBP16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 HIST2H2AA3Q6FI13 130 aa16.81■□□□□ 0.28
SH3RF1-201ENST00000284637 BAP1Q92560 729 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms