RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 MTAPQ13126 283 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 KLF1Q13351 362 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-234ENST00000642041 FZD5Q13467 585 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 TAZQ16635 292 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 C2CD6Q53TS8 623 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 CFAP58Q5T655 872 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 ACBD5Q5T8D3 534 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-234ENST00000642041 VSTM1Q6UX27 236 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 SPOCD1Q6ZMY3 1216 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 MAMSTRQ6ZN01 415 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 PRR23BQ6ZRT6 265 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 MTSS1LQ765P7 747 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 PIGZQ86VD9 579 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 KRT222Q8N1A0 295 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 C3orf58Q8NDZ4 430 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 AENQ8WTP8 325 aaKnown RBP17.86■□□□□ 0.45
PHGDH-234ENST00000642041 CENPIQ92674 756 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-234ENST00000642041 HAUS1Q96CS2 278 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 FERMT1Q9BQL6 677 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 HERC2P3Q9BVR0 1158 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 FUT8Q9BYC5 575 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 DMAP1Q9NPF5 467 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-234ENST00000642041 CHORDC1Q9UHD1 332 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-234ENST00000642041 CDH7Q9ULB5 785 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 FAN1Q9Y2M0 1017 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 PRG3Q9Y2Y8 225 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-234ENST00000642041 SF3B1O75533 1304 aaKnown RBP eCLIP17.86■□□□□ 0.458e-6■■■■■ 107
PHGDH-234ENST00000642041 F5P12259 2224 aa17.86■□□□□ 0.45
PHGDH-234ENST00000642041 FLNBO75369 2602 aaKnown RBP17.85■□□□□ 0.45
PHGDH-234ENST00000642041 LRRD1A4D1F6 860 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 NRP1O14786 923 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 PAPSS1O43252 624 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-234ENST00000642041 OPA1O60313 960 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 DAB1O75553 588 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 SPATA31D3P0C874 917 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 RARAP10276 462 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 KDELR1P24390 212 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 MIPP30301 263 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 STIP1P31948 543 aaKnown RBP17.85■□□□□ 0.45
PHGDH-234ENST00000642041 TAS2R40P59535 323 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 SLC25A11Q02978 314 aaKnown RBP17.85■□□□□ 0.45
PHGDH-234ENST00000642041 ORC1Q13415 861 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 SLMAPQ14BN4 828 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 SLC25A52Q3SY17 297 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 MDH1BQ5I0G3 518 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 RAB41Q5JT25 222 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 UNQ6494/PRO21346Q6UXR6 183 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 SPATA31D4Q6ZUB0 917 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 PCGF5Q86SE9 256 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 OSTM1Q86WC4 334 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 ARHGAP18Q8N392 663 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 PAAF1Q9BRP4 392 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 DPEP3Q9H4B8 488 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 POPDC2Q9HBU9 364 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 EHD2Q9NZN4 543 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 WHRNQ9P202 907 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 CACNG4Q9UBN1 327 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 ADAM28Q9UKQ2 775 aa17.85■□□□□ 0.45
PHGDH-234ENST00000642041 CFAP69A5D8W1 941 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 C1QTNF9BB2RNN3 333 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 AP1G2O75843 785 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 ENDOD1O94919 500 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 C1QTNF9P0C862 333 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 RALAP11233 206 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 CCDC130P13994 396 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 MAGEA11P43364 429 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 ADCY1Q08828 1119 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 ZNF252P-AS1Q0IIN9 211 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 HLTFQ14527 1009 aaKnown RBP eCLIP17.84■□□□□ 0.45
PHGDH-234ENST00000642041 PPP2R5DQ14738 602 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 CASP8Q14790 479 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 PPP1R7Q15435 360 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 ERMARDQ5T6L9 678 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 DUPD1Q68J44 220 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 ZNF852Q6ZMS4 543 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 CLEC20AQ6ZU45 233 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 TPRG1Q6ZUI0 275 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 BBS12Q6ZW61 710 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 TAS1R1Q7RTX1 841 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 PHLDB2Q86SQ0 1253 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 FAM35AQ86V20 835 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 JAMLQ86YT9 394 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 SPATA2LQ8IUW3 424 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-234ENST00000642041 SCUBE3Q8IX30 993 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 JOSD2Q8TAC2 188 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 PGAP3Q96FM1 320 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-234ENST00000642041 PCED1BQ96HM7 432 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 RUFY1Q96T51 708 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 B3GNT5Q9BYG0 378 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 TRIM7Q9C029 511 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 DCLK3Q9C098 648 aa17.84■□□□□ 0.45
PHGDH-234ENST00000642041 MRPS17Q9Y2R5 130 aaKnown RBP17.84■□□□□ 0.45
PHGDH-234ENST00000642041 hCG_1818297A0A087WSY0 165 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 TRIM66O15016 1216 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 ITGAVP06756 1048 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 CDKN2BP42772 138 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 MARCKSL1P49006 195 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 GLUD2P49448 558 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 RGS7P49802 495 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 OGDHQ02218 1023 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms