RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SSU72P8A0A1W2PR75 194 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 TCRBV5S1A1TA0A578 114 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 TYW5A2RUC4 315 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 KCNU1A8MYU2 1149 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 CACNG3O60359 315 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 TULP3O75386 442 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 EGFP01133 1207 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 MYBL1P10243 752 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 RDXP35241 583 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 RFC1P35251 1148 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 PTPN9P43378 593 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 RPS9P46781 194 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 MTA1Q13330 715 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 PREPLQ4J6C6 727 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 FAM133BQ5BKY9 247 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 BRMS1LQ5PSV4 323 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 FYB2Q5VWT5 728 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 NADSYN1Q6IA69 706 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 GRAMD4Q6IC98 578 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 ALKBH5Q6P6C2 394 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 RFWD3Q6PCD5 774 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 ETFBKMTQ8IXQ9 262 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 ATOH1Q92858 354 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 CLDN23Q96B33 292 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 TMA16Q96EY4 203 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 ADAM33Q9BZ11 813 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 WDCPQ9H6R7 721 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 CALCOCO1Q9P1Z2 691 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 MYO1AQ9UBC5 1043 aa20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 XPO7Q9UIA9 1087 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-214ENST00000597396 AKR1B10O60218 316 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 ADCY5O95622 1261 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 PENKP01210 267 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 DESP17661 470 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 SLC6A4P31645 630 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 CXCR3P49682 368 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 MAPK8IP2Q13387 824 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 FZD5Q13467 585 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 CCINQ13939 588 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 C15orf59Q2T9L4 293 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 CCDC14Q49A88 953 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 RAP1GAP2Q684P5 730 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 PLEKHA7Q6IQ23 1121 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 TC2NQ8N9U0 490 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 CHP1Q99653 195 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 IRX2Q9BZI1 471 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 IRF2BPLQ9H1B7 796 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 DLGAP2Q9P1A6 1054 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 SCINQ9Y6U3 715 aa20.38■□□□□ 0.85
SHKBP1-214ENST00000597396 CACNA1IQ9P0X4 2223 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 TBL1XO60907 577 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 KAT7O95251 611 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 TACR2P21452 398 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 DGKGP49619 791 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 NUBP1P53384 320 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 ATXN1P54253 815 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 RPL7AP62424 266 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 GFPT1Q06210 699 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 MAMLD1Q13495 774 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 SLC18A3Q16572 532 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 FBXO43Q4G163 708 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 PPP1R15BQ5SWA1 713 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 PIK3R6Q5UE93 754 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 NUDT18Q6ZVK8 323 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 STRADAQ7RTN6 431 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 LGI2Q8N0V4 545 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 SYNPOQ8N3V7 929 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 DTWD2Q8NBA8 298 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 HJURPQ8NCD3 748 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 CCDC42Q96M95 316 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 TKTL2Q9H0I9 626 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 CHRDQ9H2X0 955 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 DOCK4Q8N1I0 1966 aa20.37■□□□□ 0.85
SHKBP1-214ENST00000597396 F5H5T6 163 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 H0Y858 1186 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 PAGE1O75459 146 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 GRIA2P42262 883 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 MS4A13Q5J8X5 152 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 BNIPLQ7Z465 357 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 FAM131BQ86XD5 332 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 FAM172AQ8WUF8 416 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 SIK2Q9H0K1 926 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 NHEJ1Q9H9Q4 299 aaPredicted RBP20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 MRPL47Q9HD33 250 aaKnown RBP20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 SPATA6Q9NWH7 488 aaPredicted RBP20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 ARHGEF38Q9NXL2 777 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 STIM2Q9P246 746 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 CACNA1HO95180 2353 aa20.36■□□□□ 0.85
SHKBP1-214ENST00000597396 TBC1D3BA6NDS4 549 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 GFRA2O00451 464 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 TRIM24O15164 1050 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 CCP110O43303 1012 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 GALR2O43603 387 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 RNF40O75150 1001 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 ENDOD1O94919 500 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 HOXD9P28356 352 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 CDC25BP30305 580 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 SGSHP51688 502 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 ZNF143P52747 638 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 MESP2Q0VG99 397 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms